Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11037
(746 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29492| Best HMM Match : Ribosomal_S3_C (HMM E-Value=1.8e-28) 162 2e-40
SB_1330| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.9) 36 0.026
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_14482| Best HMM Match : Cornifin (HMM E-Value=3.7) 31 0.99
SB_27312| Best HMM Match : Pox_A32 (HMM E-Value=0.012) 31 1.3
SB_30292| Best HMM Match : fn3 (HMM E-Value=1.2e-12) 30 1.7
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 29 3.0
SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014) 29 4.0
SB_17991| Best HMM Match : GRP (HMM E-Value=7.5) 29 4.0
SB_3270| Best HMM Match : MMPL (HMM E-Value=0.68) 29 4.0
SB_51602| Best HMM Match : Glyco_hydro_38C (HMM E-Value=1.1e-31) 29 4.0
SB_42203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 29 4.0
SB_7014| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_26227| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_59749| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_56796| Best HMM Match : CITED (HMM E-Value=1.2) 28 7.0
SB_53228| Best HMM Match : CITED (HMM E-Value=2.5) 28 7.0
SB_15943| Best HMM Match : Pox_A32 (HMM E-Value=0.027) 28 7.0
SB_15117| Best HMM Match : Pox_A32 (HMM E-Value=0.038) 28 7.0
SB_10611| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_1260| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.3) 28 7.0
SB_58633| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.8) 28 7.0
SB_37846| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_37823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_19127| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_9870| Best HMM Match : GspM (HMM E-Value=1.9) 28 7.0
SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 28 9.2
SB_3465| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_23541| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_29492| Best HMM Match : Ribosomal_S3_C (HMM E-Value=1.8e-28)
Length = 240
Score = 162 bits (394), Expect = 2e-40
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +3
Query: 255 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 434
LYAEKVATRGLCAIAQ ESLRYKLIGGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 86 LYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 435 RAKSMKFVDGLMIHSGDPCNDYVNT 509
RAKSMKFVDGLM+H+G+P YV+T
Sbjct: 146 RAKSMKFVDGLMVHAGEPTTHYVDT 170
Score = 147 bits (357), Expect = 7e-36
Identities = 72/81 (88%), Positives = 77/81 (95%)
Frame = +1
Query: 13 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 192
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTPIR+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGLFKAELNEFLTRELAEDGYSGVEVRVTPIRTEIIILATRTQNVLGEKGR 64
Query: 193 RIRELTSVVQKRFNIPEQSVD 255
RIRELTSVVQKRF PE SV+
Sbjct: 65 RIRELTSVVQKRFGFPEGSVE 85
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/55 (74%), Positives = 44/55 (80%)
Frame = +2
Query: 509 ATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 673
A RHV LRQGVLGIKVKIMLPWD GK GPKKP PD + + EPKDE VP +PTSE
Sbjct: 171 AVRHVYLRQGVLGIKVKIMLPWDPTGKTGPKKPLPDQVSIVEPKDEVVPAQPTSE 225
>SB_1330| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.9)
Length = 482
Score = 36.3 bits (80), Expect = 0.026
Identities = 17/30 (56%), Positives = 17/30 (56%)
Frame = +1
Query: 565 VAVGPARQERPEEATTRPHPGNRAQGRARA 654
VA GPAR PE TRPHPG GR A
Sbjct: 107 VAAGPARITSPEPPATRPHPGRVEAGRRLA 136
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 31.9 bits (69), Expect = 0.57
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 79 RELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKG-RRIRELTSVVQKRFNIPEQSVD 255
R+ AE+ ++ I SE+++MA R EK IR V + +N ++ +D
Sbjct: 2588 RDEAEEKSIEADIEKNLIESEVVVMALRNSIKTTEKSLDLIRPEAKVTEHEYNNCQRDID 2647
Query: 256 CM 261
CM
Sbjct: 2648 CM 2649
>SB_14482| Best HMM Match : Cornifin (HMM E-Value=3.7)
Length = 301
Score = 31.1 bits (67), Expect = 0.99
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 577 PARQERPEEATTRPHPGNRAQGRARA 654
PAR PE TRPHPG GR A
Sbjct: 42 PARVTSPEPPATRPHPGRVEAGRRLA 67
>SB_27312| Best HMM Match : Pox_A32 (HMM E-Value=0.012)
Length = 1115
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 577 PARQERPEEATTRPHPGNRAQGRARA 654
PAR PE TRPHPG GR A
Sbjct: 537 PARITSPEPPATRPHPGRVEAGRRLA 562
>SB_30292| Best HMM Match : fn3 (HMM E-Value=1.2e-12)
Length = 519
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 475 TLETLAMITSTRYQTCASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARA 654
T+ T+ +T+T T AS + +N G + V + + TTR +P R G+AR
Sbjct: 174 TMNTIDFVTNT---TSASSDVTYKNHGSPYDEVTATSTYQSLDRTTRTYPDGR--GQARG 228
Query: 655 PR 660
PR
Sbjct: 229 PR 230
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 568 AVGPARQERPEEATTRPHPGNRAQGRA 648
A AR PE TRPHPG GRA
Sbjct: 1497 AARDARITSPEPPATRPHPGRVEAGRA 1523
>SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 50 SRQNSMSSSLGSWPRTATPAWKCGSLPSARRSLLWPPGH-RVCSERKDAESVSSLP*Y 220
+R+ ++ +L + P T +CG + +AR L+ P H R + V SLP Y
Sbjct: 272 TRKMMLTRALSTTPSTTPELRRCGGVLTAREGLIMSPNHPRPYPSDTHCKWVISLPSY 329
>SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014)
Length = 988
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +1
Query: 535 RSTRNQGQNHVAVGPA--RQERPEEATTRPHPGNRAQGRARA 654
+ R + VA PA R PE TRPHPG GR A
Sbjct: 801 KQRREPARTPVAALPAAARVTSPEPPATRPHPGRVEAGRRLA 842
>SB_17991| Best HMM Match : GRP (HMM E-Value=7.5)
Length = 186
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 475 TLETLAMITSTRYQTCASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARA 654
T+ T+ ++T+T T AS + +N G + V + + TTR +P R G+ R
Sbjct: 80 TMNTIDLVTNT---TSASSDVTYKNHGSPYDEVTATSTYQSLDRTTRTYPDGR--GQERG 134
Query: 655 PR 660
PR
Sbjct: 135 PR 136
>SB_3270| Best HMM Match : MMPL (HMM E-Value=0.68)
Length = 401
Score = 29.1 bits (62), Expect = 4.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 416 WQAAWSTCQINEVCRWTHDPLW 481
W+ AW+ C + E +T++P W
Sbjct: 76 WKQAWTPCSLQETTIYTNNPPW 97
>SB_51602| Best HMM Match : Glyco_hydro_38C (HMM E-Value=1.1e-31)
Length = 976
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 410 CIWQAAWSTCQINEVCRWTHDPLWRP 487
C W + W + E WTH P RP
Sbjct: 185 CRWLSQWKQSEEEESVLWTHSPARRP 210
>SB_42203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +2
Query: 275 YSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPFHHGIWCPW 397
Y+W L + P + ++ Y R + L C+P + W W
Sbjct: 4 YNWWLAWNPALLCLMRQYNRWLAWNPALLCNPRQYNRWLAW 44
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 538 STRNQGQNHVAVGPARQERPEEATTRP 618
+++N + H + PA+QE+PE + +P
Sbjct: 162 TSKNTSRTHKIIAPAKQEKPERYSRKP 188
>SB_7014| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 577 PARQERPEEATTRPHPGNRAQGRARA 654
P R PE TRPHPG GR A
Sbjct: 185 PPRITSPEPPATRPHPGRVEAGRRLA 210
>SB_26227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 28.7 bits (61), Expect = 5.3
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +3
Query: 252 RLYAEKVATRGLCAIAQAESLRYKLIGGLA--VRRACYGVLRFIMESGARGCEVVVSGKL 425
R +AE +R + +Q+ESL K GL+ RR GV R + GA G ++ K+
Sbjct: 307 RNFAESFRSRSRTSTSQSESLNEKNSKGLSKGKRRNTNGVERSHFKEGAMGS--LIGSKV 364
Query: 426 R---GQRAKSMKFVDGLMIH 476
R + S+K G MI+
Sbjct: 365 RNDCNNKTGSLKKATGEMIN 384
>SB_59749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1091
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 568 AVGPARQERPEEATTRPHPGNRAQGRARA 654
A AR PE TRPHPG GR A
Sbjct: 820 AARDARITSPEPPATRPHPGRVEAGRRLA 848
>SB_56796| Best HMM Match : CITED (HMM E-Value=1.2)
Length = 431
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 568 AVGPARQERPEEATTRPHPGNRAQGRARA 654
A AR PE TRPHPG GR A
Sbjct: 42 AARDARITSPEPPATRPHPGRVEAGRRLA 70
>SB_53228| Best HMM Match : CITED (HMM E-Value=2.5)
Length = 417
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 568 AVGPARQERPEEATTRPHPGNRAQGRARA 654
A AR PE TRPHPG GR A
Sbjct: 168 AARDARITSPEPPATRPHPGRVEAGRRLA 196
>SB_15943| Best HMM Match : Pox_A32 (HMM E-Value=0.027)
Length = 804
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 580 ARQERPEEATTRPHPGNRAQGRARA 654
AR PE TRPHPG GR A
Sbjct: 604 ARVTSPEPPATRPHPGRVEAGRRLA 628
>SB_15117| Best HMM Match : Pox_A32 (HMM E-Value=0.038)
Length = 771
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 568 AVGPARQERPEEATTRPHPGNRAQGRARA 654
A AR PE TRPHPG GR A
Sbjct: 386 AARDARITSPEPPATRPHPGRVEAGRRLA 414
>SB_10611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 592 RPEEATTRPHPGNRAQGRARA 654
RPE TRPHPG GR A
Sbjct: 546 RPEPPATRPHPGRVEAGRRLA 566
>SB_1260| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.3)
Length = 220
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 568 AVGPARQERPEEATTRPHPGNRAQGRARA 654
A AR PE TRPHPG GR A
Sbjct: 42 AARDARITSPEPPATRPHPGRVEAGRRLA 70
>SB_58633| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.8)
Length = 599
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 568 AVGPARQERPEEATTRPHPGNRAQGRARA 654
A AR PE TRPHPG GR A
Sbjct: 425 AARDARITSPEPPATRPHPGRVEAGRRLA 453
>SB_37846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 568 AVGPARQERPEEATTRPHPGNRAQGRARA 654
A AR PE TRPHPG GR A
Sbjct: 284 AARDARITSPEPPATRPHPGRVEAGRRLA 312
>SB_37823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 285 GHE*PPFQHTIYRLLWNVESLLYYGS 208
GH ++H RL WN+E L +Y S
Sbjct: 263 GHHVGDWEHVTIRLNWNMEPLQFYAS 288
>SB_19127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1492
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 580 ARQERPEEATTRPHPGNRAQGRARA 654
AR PE TRPHPG GR A
Sbjct: 1351 ARITSPEPPATRPHPGRVGAGRRLA 1375
>SB_9870| Best HMM Match : GspM (HMM E-Value=1.9)
Length = 522
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 580 ARQERPEEATTRPHPGNRAQGRARA 654
AR PE TRPHPG GR A
Sbjct: 181 ARVTSPEPPATRPHPGRVEAGRRLA 205
>SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 568 AVGPARQERPEEATTRPHPGNRAQGRARA 654
A AR PE TRPHPG GR A
Sbjct: 781 AAHDARITSPEPPATRPHPGRVEAGRRLA 809
>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 519
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 672 SLVGSRGTGSSLGSVTRMWSGCGFFGPFLPCW 577
S+ S G GSSLGS+ R W P W
Sbjct: 215 SIASSLGLGSSLGSMGRDWGRMSTNSPSFQSW 246
>SB_3465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 27.9 bits (59), Expect = 9.2
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +1
Query: 475 TLETLAMITSTRYQTCASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARA 654
T+ T+ ++T T T AS + N G + V + + TTR P R G+AR
Sbjct: 392 TMNTIDLVTHT---TSASSDATYANHGSPYDEVTATSTYQSLDRTTRTCPDGR--GQARG 446
Query: 655 PR 660
PR
Sbjct: 447 PR 448
>SB_23541| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 957
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 580 ARQERPEEATTRPHPGNRAQGRARA 654
AR PE TRPHPG GR A
Sbjct: 792 ARITSPEPPATRPHPGRVEAGRRLA 816
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,370,978
Number of Sequences: 59808
Number of extensions: 511912
Number of successful extensions: 1692
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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