Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11037
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal prote... 155 3e-38
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical p... 29 4.6
Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.6
X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein... 29 4.6
U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein... 29 4.6
U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein... 29 4.6
U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein... 29 4.6
U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protei... 29 4.6
AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3 pr... 29 4.6
AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone prote... 29 4.6
AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone prote... 29 4.6
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 28 6.1
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 28 6.1
U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical p... 28 6.1
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 28 8.1
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 28 8.1
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 28 8.1
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 28 8.1
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 3 protein.
Length = 247
Score = 155 bits (376), Expect = 3e-38
Identities = 71/83 (85%), Positives = 78/83 (93%)
Frame = +3
Query: 255 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 434
LYAEKV+ RGLCA+AQ ESLRYKL+GGLAVRRACYGVLRFIMESGA+G EV+VSGKLRGQ
Sbjct: 88 LYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKLRGQ 147
Query: 435 RAKSMKFVDGLMIHSGDPCNDYV 503
RAK+MKFVDGLMIHSG P NDY+
Sbjct: 148 RAKAMKFVDGLMIHSGHPVNDYI 170
Score = 126 bits (303), Expect = 2e-29
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +1
Query: 1 AVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 180
A N++KK+K V G+FKAELN FL +ELAEDGYSGVEVR TP R+E+IIMATRTQ+VLG
Sbjct: 3 ANQNVTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLG 62
Query: 181 EKGRRIRELTSVVQKRFNIPEQSVD 255
E+GRRI+ELTSVVQKRF E SV+
Sbjct: 63 ERGRRIKELTSVVQKRFGFEEGSVE 87
Score = 81.4 bits (192), Expect = 6e-16
Identities = 34/57 (59%), Positives = 45/57 (78%)
Frame = +2
Query: 503 QHATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 673
Q A RHV LRQGV+GIKVKIMLP+D +G+NGP+ PDH+ + EP++E +P EP S+
Sbjct: 171 QQAVRHVQLRQGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQ 227
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 10 NISKKRKFVGDGVFKAELNEFLTRELAEDGY 102
+I KK F GDG F E E+ +DGY
Sbjct: 892 DIPKKFSFKGDGEFFVSQREVFENEILDDGY 922
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 10 NISKKRKFVGDGVFKAELNEFLTRELAEDGY 102
+I KK F GDG F E E+ +DGY
Sbjct: 892 DIPKKFSFKGDGEFFVSQREVFENEILDDGY 922
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 85 LAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 246
L G G + IR+E+ + ++G+ G+ +REL + IPE+
Sbjct: 543 LPSSGMDGDRSHMLRIRTEVSVPTRIIGRIIGKGGQNVRELQRITGAVVKIPEE 596
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 85 LAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 246
L G G + IR+E+ + ++G+ G+ +REL + IPE+
Sbjct: 667 LPSSGMDGDRSHMLRIRTEVSVPTRIIGRIIGKGGQNVRELQRITGAVVKIPEE 720
>Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical
protein T10C6.13 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.7 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.3 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.2 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical
protein F54E12.1 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical
protein F08G2.3 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical
protein B0035.10 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical
protein F22B3.2 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein
protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein 6
protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein 17
protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein 27
protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protein
59 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3
protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone protein
32 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone protein
49 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 269 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 373
GG P RYRPG ++ + R + T L+ +PF
Sbjct: 34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPF 68
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 733 YILSDSGDRLRQRRGRKGAHFAGRLEGH 650
Y+ +GD LR R R G+ + +EGH
Sbjct: 28 YVHLSAGDLLRAERERAGSEYGALIEGH 55
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 499 TSTRYQTCASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPR 660
+S+ + RSTR +G+ A QE+ E T+ H N+A+ R PR
Sbjct: 418 SSSATSSAVPTPRSTRGRGRKSQANEENLQEKETEDPTKTHDTNQAKS-TRTPR 470
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 736 SYILSDSGDRLRQRRGRKGAHFAGRLEGH 650
+Y+ +GD LR R R+G+ F +E H
Sbjct: 27 NYVHLSAGDLLRAERQREGSEFGALIESH 55
>U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical
protein T02G5.12 protein.
Length = 556
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 371 TENTIASTTYSETSDKLVS*RFGLGDSAKATSSHLFSIQSTDCSGMLNRFC 219
T NTI + +D+ + GLGD +++I T C G++ FC
Sbjct: 395 TANTIGRLIFGVVADQKLPLPAGLGDDTARNRLWMYNISLTIC-GIVTAFC 444
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 605 PQPDHILVTEPKDEPVPL---EPTSE 673
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 605 PQPDHILVTEPKDEPVPL---EPTSE 673
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 605 PQPDHILVTEPKDEPVPL---EPTSE 673
P+P+ ++++EP EPVP+ EP E
Sbjct: 468 PEPEPVVISEPVPEPVPIVVEEPPKE 493
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 605 PQPDHILVTEPKDEPVPL---EPTSE 673
P+P+ ++++EP EPVP+ EP E
Sbjct: 468 PEPEPVVISEPVPEPVPIVVEEPPKE 493
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 605 PQPDHILVTEPKDEPVPL---EPTSE 673
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 605 PQPDHILVTEPKDEPVPL---EPTSE 673
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 648 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 547
GS L + + +G + GP + CWS G ++ TL+
Sbjct: 234 GSPLYASPEIINGTPYKGPEVDCWSLGILLYTLV 267
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 648 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 547
GS L + + +G + GP + CWS G ++ TL+
Sbjct: 234 GSPLYASPEIINGTPYKGPEVDCWSLGILLYTLV 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,717,998
Number of Sequences: 27780
Number of extensions: 364704
Number of successful extensions: 1179
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -