Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11036
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 158 4e-39
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 158 4e-39
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 158 4e-39
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 46 3e-05
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 46 3e-05
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 46 3e-05
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 45 7e-05
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 43 3e-04
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 43 3e-04
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 34 0.10
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 33 0.18
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 33 0.18
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 29 3.0
Z48795-6|CAA88730.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81142-6|CAB03508.1| 344|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 6.8
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 6.8
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 6.8
AF125452-1|AAD12828.1| 311|Caenorhabditis elegans Hypothetical ... 28 6.8
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 6.8
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 9.0
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 158 bits (384), Expect = 4e-39
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +1
Query: 1 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 180
GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N
Sbjct: 191 GKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQN 250
Query: 181 ITTEVKSVEMHHEALQEAVPGDNVG 255
+TTEVKSVEMHHE+L EAVPGDNVG
Sbjct: 251 VTTEVKSVEMHHESLPEAVPGDNVG 275
Score = 138 bits (334), Expect = 4e-33
Identities = 65/95 (68%), Positives = 72/95 (75%)
Frame = +3
Query: 219 SSPRSCTWRQCRFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGY 398
S P + FNVKNVSVK++RRG V DSK +P K A F AQVI++NHPGQISNGY
Sbjct: 264 SLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGY 323
Query: 399 TPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPK 503
TPVLDCHTAHIACKF E+KEKVDRRTGK E PK
Sbjct: 324 TPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPK 358
Score = 87.4 bits (207), Expect = 1e-17
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = +2
Query: 497 PKIHKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 649
PK KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 357 PKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 158 bits (384), Expect = 4e-39
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +1
Query: 1 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 180
GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N
Sbjct: 225 GKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQN 284
Query: 181 ITTEVKSVEMHHEALQEAVPGDNVG 255
+TTEVKSVEMHHE+L EAVPGDNVG
Sbjct: 285 VTTEVKSVEMHHESLPEAVPGDNVG 309
Score = 138 bits (334), Expect = 4e-33
Identities = 65/95 (68%), Positives = 72/95 (75%)
Frame = +3
Query: 219 SSPRSCTWRQCRFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGY 398
S P + FNVKNVSVK++RRG V DSK +P K A F AQVI++NHPGQISNGY
Sbjct: 298 SLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGY 357
Query: 399 TPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPK 503
TPVLDCHTAHIACKF E+KEKVDRRTGK E PK
Sbjct: 358 TPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPK 392
Score = 87.4 bits (207), Expect = 1e-17
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = +2
Query: 497 PKIHKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 649
PK KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 391 PKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 158 bits (384), Expect = 4e-39
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +1
Query: 1 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 180
GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N
Sbjct: 225 GKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQN 284
Query: 181 ITTEVKSVEMHHEALQEAVPGDNVG 255
+TTEVKSVEMHHE+L EAVPGDNVG
Sbjct: 285 VTTEVKSVEMHHESLPEAVPGDNVG 309
Score = 138 bits (334), Expect = 4e-33
Identities = 65/95 (68%), Positives = 72/95 (75%)
Frame = +3
Query: 219 SSPRSCTWRQCRFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGY 398
S P + FNVKNVSVK++RRG V DSK +P K A F AQVI++NHPGQISNGY
Sbjct: 298 SLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGY 357
Query: 399 TPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPK 503
TPVLDCHTAHIACKF E+KEKVDRRTGK E PK
Sbjct: 358 TPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPK 392
Score = 87.4 bits (207), Expect = 1e-17
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = +2
Query: 497 PKIHKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 649
PK KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 391 PKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = +1
Query: 4 KCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAP 174
K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G I +
Sbjct: 231 KQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGG 289
Query: 175 ANITTEVKSV----EMHHEALQEAVPGDNVG 255
T VKSV E + + +A PGD +G
Sbjct: 290 TKDGTTVKSVISGLESFRKTVDQAEPGDQLG 320
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = +1
Query: 4 KCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAP 174
K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G I +
Sbjct: 232 KQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGG 290
Query: 175 ANITTEVKSV----EMHHEALQEAVPGDNVG 255
T VKSV E + + +A PGD +G
Sbjct: 291 TKDGTTVKSVISGLESFRKTVDQAEPGDQLG 321
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = +1
Query: 4 KCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAP 174
K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G I +
Sbjct: 232 KQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGG 290
Query: 175 ANITTEVKSV----EMHHEALQEAVPGDNVG 255
T VKSV E + + +A PGD +G
Sbjct: 291 TKDGTTVKSVISGLESFRKTVDQAEPGDQLG 321
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/84 (26%), Positives = 44/84 (52%)
Frame = +1
Query: 1 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 180
G CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G ++ V+ ++
Sbjct: 372 GPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMSS 430
Query: 181 ITTEVKSVEMHHEALQEAVPGDNV 252
+T +++ + GD +
Sbjct: 431 VTAATVKECANNDGSRHCFAGDYI 454
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 497 PKIHKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 649
P+ G +A+V + + +E+F LGR R T+A G+++ V
Sbjct: 538 PRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/84 (26%), Positives = 44/84 (52%)
Frame = +1
Query: 1 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 180
G CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G ++ V+ ++
Sbjct: 390 GPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMSS 448
Query: 181 ITTEVKSVEMHHEALQEAVPGDNV 252
+T +++ + GD +
Sbjct: 449 VTAATVKECANNDGSRHCFAGDYI 472
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 497 PKIHKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 649
P+ G +A+V + + +E+F LGR R T+A G+++ V
Sbjct: 556 PRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 GKCLIEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 177
G C IE +D +LP R + P+R + + Y +GTV +G++E+G ++ G +V P
Sbjct: 318 GPCFIEFIDVLLPSYKRDFNGPVRCTVAEKYS--EMGTVIIGKMESGCVQKGDTLVVMPN 375
Query: 178 NITTEVKSVEMHHEALQEAVPGDNV 252
+V + + V GDN+
Sbjct: 376 KQPVQVLQIWADDVETERVVAGDNI 400
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 500 KIHKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-VIKAV 649
K K + I+ L +P +E F+E+P LGRF +RD +T+A+G V+K V
Sbjct: 481 KFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +3
Query: 252 RFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 431
+F +K + EL+ G++ S ++ K F A+V+VL H I++GY+ VL +A
Sbjct: 401 KFKLKGIEENELQGGFIIC-SPDSLAKTGRVFDAEVLVLEHRSIIASGYSCVLHIQSAVE 459
Query: 432 ACKFAEIKEKVDRRTGK 482
+ +D++TG+
Sbjct: 460 EVTVKGVIATIDKKTGE 476
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +1
Query: 10 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANI 183
LI+ALD++ P R +P+ I G GTV VG +E GVLK G V +
Sbjct: 222 LIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTL 281
Query: 184 TTEVKSVEMHHEALQEAVPGDNVG 255
T +++ ++++E GD+ G
Sbjct: 282 QTTASDIQVFGKSVKEVRAGDHCG 305
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +1
Query: 10 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANI 183
LI+ALD++ P R +P+ I G GTV VG +E GVLK G V +
Sbjct: 222 LIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTL 281
Query: 184 TTEVKSVEMHHEALQEAVPGDNVG 255
T +++ ++++E GD+ G
Sbjct: 282 QTTASDIQVFGKSVKEVRAGDHCG 305
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +1
Query: 61 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQ 228
P + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 372 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVG 431
Query: 229 EAVPGDNVGST*RTCPSRNCVVVMLLVTPK 318
G + + P ++ M+LV PK
Sbjct: 432 IVKCGQSASFALKKIPKKDVRKGMVLVDPK 461
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +1
Query: 31 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 210
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 191 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 250
Query: 211 HHEALQEAVPG 243
+ + + G
Sbjct: 251 WKQRVGQVAAG 261
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +1
Query: 31 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 210
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 150 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 209
Query: 211 HHEALQEAVPG 243
+ + + G
Sbjct: 210 WKQRVGQVAAG 220
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +1
Query: 61 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQ 228
P + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 373 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRCLVG 432
Query: 229 EAVPGDNVGST*RTCPSRNCVVVMLLVTPK 318
G + + P ++ M+LV PK
Sbjct: 433 IVKCGQSASFALKKIPKKDVRQGMVLVDPK 462
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 145 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGD 246
KPGTI F P ITTE K H L+ + GD
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGD 389
>Z48795-6|CAA88730.1| 203|Caenorhabditis elegans Hypothetical
protein R05H5.7 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 117 RRQS*NWCVETRYHCC--LCPRQHHY*SQICG--DAPRSSPRSCTWRQCRFNV 263
RR+ NWC E+ C L PRQ+ + D+ + SP C QC +NV
Sbjct: 149 RRRQVNWC-ESDSECAPHLAPRQNRFFFNDATVLDSIQKSPSLCCPTQCGYNV 200
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 711 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 559
+P+V + L PPP L +LM P TV + R K P G NS K T
Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -2
Query: 798 VALFSFETLSVNKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATV 619
V L S + Y +C ++N Y L ++A+V LPPP ++ + ++ A
Sbjct: 177 VYLLSLLVVYAMMYNNCRYRYSLNVLHY--ELYCQTSAVVNLPPPKAISIMEIVIQFAIP 234
Query: 618 CLM 610
C++
Sbjct: 235 CII 237
>Z81142-6|CAB03508.1| 344|Caenorhabditis elegans Hypothetical
protein ZK1037.9 protein.
Length = 344
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -2
Query: 786 SFETLSVNKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLMS 607
S+ L+V+ +K A +S++ + ++AF ALV + P S ++ L TP ++S
Sbjct: 105 SYSRLAVDIAFEIVKKTAQRASTWLILMIAFIRALV-IRYPMSSRIEKLTTPKVAFIIIS 163
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = -3
Query: 308 TSNITTTQFLDGHVLYVEPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVS 129
TS +TT T+ + ++ ++ ST TS + + T P T +
Sbjct: 300 TSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLST 359
Query: 128 TLPTGTVP 105
++PT T P
Sbjct: 360 SIPTTTTP 367
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = -3
Query: 308 TSNITTTQFLDGHVLYVEPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVS 129
TS +TT T+ + ++ ++ ST TS + + T P T +
Sbjct: 300 TSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLST 359
Query: 128 TLPTGTVP 105
++PT T P
Sbjct: 360 SIPTTTTP 367
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 408 LDCHTAHIACKFAEIKEKVDRRTGKSTE 491
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 408 LDCHTAHIACKFAEIKEKVDRRTGKSTE 491
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AF125452-1|AAD12828.1| 311|Caenorhabditis elegans Hypothetical
protein Y39F10C.1 protein.
Length = 311
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 530 QWLHLQTYGFWVDFSRFTSTTVNFFFDFCKFAGNVGSVAIQYWC 399
+WL +T G S+F+ V+ F+ F F N G A++ +C
Sbjct: 79 EWLQSETGGMQ---SKFSEIHVHSFWSFFNFFDNTGLNAVRLYC 119
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 408 LDCHTAHIACKFAEIKEKVDRRTGKSTE 491
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/77 (24%), Positives = 26/77 (33%)
Frame = -3
Query: 329 RWVVFGVTSNITTTQFLDGHVLYVEPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVP 150
+WV T+ TTT PT + T + + +T T T
Sbjct: 56 KWVKADCTTTSTTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTE 115
Query: 149 GFNTPVSTLPTGTVPIP 99
TP +T PT T P
Sbjct: 116 TTTTPTTTTPTTTTTTP 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,430,507
Number of Sequences: 27780
Number of extensions: 431011
Number of successful extensions: 1341
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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