Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11033
(739 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 25 0.64
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.84
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.84
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.84
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 24 1.5
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 23 3.4
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.4
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.4
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 3.4
AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450 ... 23 3.4
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 3.4
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 23 3.4
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 23 3.4
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 22 4.5
DQ855491-1|ABH88178.1| 144|Tribolium castaneum chemosensory pro... 22 5.9
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 21 7.9
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 25.0 bits (52), Expect = 0.64
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -2
Query: 366 VVGERLILLATCFNASTFMLLFNVGLMMNSLSFASVLKT 250
++GE + L + F T ++ F++G + + +VLKT
Sbjct: 359 ILGETVDLFNSLFGYQTLLITFHIGSQLVLHTVKTVLKT 397
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.84
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 372 LPVVGERLILLATCFNASTFMLLFNVGLMMNSLSF 268
LP V + + LL T FN FM+ +V L + L++
Sbjct: 264 LPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNY 298
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.84
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 372 LPVVGERLILLATCFNASTFMLLFNVGLMMNSLSF 268
LP V + + LL T FN FM+ +V L + L++
Sbjct: 264 LPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNY 298
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.84
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 372 LPVVGERLILLATCFNASTFMLLFNVGLMMNSLSF 268
LP V + + LL T FN FM+ +V L + L++
Sbjct: 264 LPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNY 298
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 23.8 bits (49), Expect = 1.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 562 LQLTAKVDPSLIGGMVVSIGDKYVDMSVASKVKRYTELISAAV 690
LQ T +L+GG+V S+G V S K +ISAA+
Sbjct: 208 LQATVSFGTNLVGGIVRSLG-TLGSRVVESGTKLANMVISAAI 249
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 224 RKRARPVSTVFKTDAKLKEFIINPTLKRSMKVD 322
R+R R T F+T KEF N L R +++
Sbjct: 6 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIE 38
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -2
Query: 375 RLPVVGERLILLATCFNASTFMLLFNVGLMMNSLSF 268
++P + + L+ T FN FM+ +V L + L++
Sbjct: 263 KIPTTSDAVPLIGTYFNCIMFMVASSVVLTVVVLNY 298
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -2
Query: 375 RLPVVGERLILLATCFNASTFMLLFNVGLMMNSLSF 268
++P + + L+ T FN FM+ +V L + L++
Sbjct: 263 KIPTTSDAVPLIGTYFNCIMFMVASSVVLTVVVLNY 298
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 224 RKRARPVSTVFKTDAKLKEFIINPTLKRSMKVD 322
RKR R T ++T KEF N L R +++
Sbjct: 242 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 274
>AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q7 protein.
Length = 505
Score = 22.6 bits (46), Expect = 3.4
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = +2
Query: 341 NKISLSPTTGNLLGLLAENGRLDKLEAVINAFKIMMAAHRGEVTCEVVTAKPLDQARGKI 520
N + L + N+ L E GRL +NA + A CE+V + P + I
Sbjct: 51 NILPLYTSAENIFKQLREWGRLYYPIYKLNAAHLAAANILSPEDCELVLSNPTHMEKSAI 110
Query: 521 WKQRLRNS*RAMKLCSLQLKW 583
+ L + L S LKW
Sbjct: 111 Y-NLLHDWLGTGLLTSTGLKW 130
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 224 RKRARPVSTVFKTDAKLKEFIINPTLKRSMKVD 322
RKR R T ++T KEF N L R +++
Sbjct: 244 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 276
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 224 RKRARPVSTVFKTDAKLKEFIINPTLKRSMKVD 322
R+R R T F+T KEF N L R +++
Sbjct: 157 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIE 189
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 224 RKRARPVSTVFKTDAKLKEFIINPTLKRSMKVD 322
R+R R T F+T KEF N L R +++
Sbjct: 216 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIE 248
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 565 QLTAKVDPSLIGGMVVSIGDKYVDMSVASKVKRYTELI 678
QLTA V ++ G + + I D Y+ + K +++ ++
Sbjct: 4 QLTACVGSAIAGFLFLLICDSYLKIYHKEKYRKFCRIL 41
>DQ855491-1|ABH88178.1| 144|Tribolium castaneum chemosensory
protein 5 protein.
Length = 144
Score = 21.8 bits (44), Expect = 5.9
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 553 NETLQLTAKVDPSLIGGMVVSIGDKYVDMSVASKVKR 663
NE QL AK DP I I D Y D S K+
Sbjct: 109 NEWNQLVAKYDPDGIYRKQYEIDDDY-DYSELDSAKK 144
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +3
Query: 144 VQVFGLEGRYASALFSAASKTKALDI 221
+Q L RY L+ S ALD+
Sbjct: 134 IQTLKLAARYIDFLYHVLSNENALDV 159
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,687
Number of Sequences: 336
Number of extensions: 3657
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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