Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11031X
(529 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 158 5e-40
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 157 7e-40
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 157 7e-40
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 93 2e-20
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 90 2e-19
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 70 2e-13
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.005
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.005
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 33 0.020
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 31 0.14
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 29 0.57
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 28 0.75
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 27 1.7
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 1.7
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 27 2.3
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 26 3.0
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 26 4.0
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 7.0
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 7.0
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 9.2
SPAC27F1.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.2
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 158 bits (383), Expect = 5e-40
Identities = 75/88 (85%), Positives = 79/88 (89%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R IDIALWKFET KY VT+IDAPG RDFIKNMITGTSQADCAVLI+ GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGIS 128
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
K+GQTREHALLA+TLGVKQLIV VNKMD
Sbjct: 129 KDGQTREHALLAYTLGVKQLIVAVNKMD 156
Score = 141 bits (341), Expect = 7e-35
Identities = 64/68 (94%), Positives = 66/68 (97%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 157 bits (382), Expect = 7e-40
Identities = 74/88 (84%), Positives = 79/88 (89%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R IDIALWKFET KY VT+IDAPG RDFIKNMITGTSQADCA+LI+ GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGIS 128
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
K+GQTREHALLA+TLGVKQLIV VNKMD
Sbjct: 129 KDGQTREHALLAYTLGVKQLIVAVNKMD 156
Score = 141 bits (341), Expect = 7e-35
Identities = 64/68 (94%), Positives = 66/68 (97%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 157 bits (382), Expect = 7e-40
Identities = 74/88 (84%), Positives = 79/88 (89%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R IDIALWKFET KY VT+IDAPG RDFIKNMITGTSQADCA+LI+ GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGIS 128
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
K+GQTREHALLA+TLGVKQLIV VNKMD
Sbjct: 129 KDGQTREHALLAYTLGVKQLIVAVNKMD 156
Score = 141 bits (341), Expect = 7e-35
Identities = 64/68 (94%), Positives = 66/68 (97%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 93.5 bits (222), Expect = 2e-20
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
+++ FET +++DAPG + ++ NMI G SQAD VL+++A GEFEAG + GQ
Sbjct: 304 VEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQ 363
Query: 437 TREHALLAFTLGVKQLIVGVNKMD 508
TREHA+LA T G+ L+V +NKMD
Sbjct: 364 TREHAVLARTQGINHLVVVINKMD 387
Score = 80.6 bits (190), Expect = 1e-16
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 235 AERE 246
ERE
Sbjct: 296 EERE 299
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 90.2 bits (214), Expect = 2e-19
Identities = 44/88 (50%), Positives = 55/88 (62%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R +D+A FE+ K I DAPG RDFI MI G S AD AVL+V + FE G
Sbjct: 239 RGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFL 298
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
+NGQTREHA L LG+ +++V VNK+D
Sbjct: 299 ENGQTREHAYLLRALGISEIVVSVNKLD 326
Score = 72.5 bits (170), Expect = 4e-14
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 235 AER 243
ER
Sbjct: 235 EER 237
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 69.7 bits (163), Expect = 2e-13
Identities = 37/88 (42%), Positives = 54/88 (61%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R I A ++ET+ + +D PG D+IKNMITG + D A+++V+A G+
Sbjct: 100 RGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP---- 155
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
QTREH LLA +GVKQ++V +NK+D
Sbjct: 156 ---QTREHLLLARQVGVKQIVVYINKVD 180
Score = 35.1 bits (77), Expect = 0.007
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 135
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.005
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.005
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 33.5 bits (73), Expect = 0.020
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +2
Query: 296 YVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 475
+V+ +D PG + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 476 KQLIVGVNKMD 508
K +I+ NK+D
Sbjct: 163 KHIIILQNKVD 173
Score = 25.0 bits (52), Expect = 7.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 37 PKMGKEKTHINIVVIGHVDSGKST 108
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 30.7 bits (66), Expect = 0.14
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 278 FETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 448
FE S Y + IID PG DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
Score = 29.1 bits (62), Expect = 0.43
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144
NI + H+DSGK+T T ++Y G I
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 28.7 bits (61), Expect = 0.57
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
Score = 26.6 bits (56), Expect = 2.3
Identities = 26/88 (29%), Positives = 38/88 (43%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R I+ A F + +ID PG DF + + D AV I+ + AG+
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV- 130
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
QT+ A G+ ++I VNKMD
Sbjct: 131 -EAQTKVVWKQATKRGIPKVIF-VNKMD 156
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 28.3 bits (60), Expect = 0.75
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 236 LSVRWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIV 388
+S++ P+ +A+ + + ID PG DF+ + + +D VL+V
Sbjct: 190 MSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 269 LWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTG 403
++ + Y + +ID PG DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
Score = 24.6 bits (51), Expect = 9.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 150
N VI H+D GKST + ++ G I++
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINE 87
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 27.1 bits (57), Expect = 1.7
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +2
Query: 293 YYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 472
Y + +ID+PG DF + + + D A ++V A G I+ Q A+
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITVLRQ-------AWIDR 146
Query: 473 VKQLIVGVNKMDPL 514
+K ++V +NKMD L
Sbjct: 147 IKVILV-INKMDRL 159
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 26.6 bits (56), Expect = 2.3
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = -1
Query: 286 SFELPESNIDWIPPHAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWW 107
S L N D + V +PK I I++ F P S S C+Y S D W
Sbjct: 12 SSNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSW 71
Query: 106 WT 101
T
Sbjct: 72 RT 73
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 26.2 bits (55), Expect = 3.0
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -1
Query: 382 EHSAISLRGSCDHVLDEISVPRSINDG-NIVLASF-ELPESNIDWIPPHAQPLVCP 221
EH +IS +G+C+ V S R N +LASF E + +I I PH + L P
Sbjct: 175 EHKSISTKGACNRVR---SARRPANSSKESLLASFHETGKVHIWDIAPHLRSLDSP 227
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.8 bits (54), Expect = 4.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 305 IIDAPGDRDFIKNMITGTSQADCAVLIV 388
IID PG F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 7.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 184 PGPPSRTSRWYVCQYHHIC 128
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.0 bits (52), Expect = 7.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 148 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEREVVSNRY 264
+R IEKFEK +E + + ++KL E +S RY
Sbjct: 577 EREIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERY 615
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 24.6 bits (51), Expect = 9.2
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 257 IDIALWKFETSKYYV--TIIDAPGDRDFIKN 343
I+I + E +++ T+ID PG DFI N
Sbjct: 73 IEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC27F1.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 24.6 bits (51), Expect = 9.2
Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 194 KDPSNMLGYWTN*RLSVRWYPIDIAL-WKFETSKYYVTIIDA 316
K P ++ YW + RLS+ ++ + A+ + + KY +++ D+
Sbjct: 37 KAPKCLVPYWLSIRLSLLYFKLTEAISFTEKCEKYNISLFDS 78
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,120,702
Number of Sequences: 5004
Number of extensions: 42004
Number of successful extensions: 156
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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