Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11031X
(529 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 161 2e-40
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 161 2e-40
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 151 3e-37
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 146 1e-35
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 2e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 110 5e-25
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 110 5e-25
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 100 7e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 66 1e-11
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 66 1e-11
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 63 1e-10
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 63 1e-10
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 63 1e-10
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 37 0.008
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 35 0.041
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.055
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.096
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.17
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.17
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 32 0.22
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 32 0.29
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 32 0.29
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.51
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.51
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.6
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.6
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical... 29 2.7
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical... 29 2.7
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 29 2.7
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z67755-4|CAA91757.1| 336|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical pr... 27 6.3
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 27 8.3
AC199158-9|ABO33285.1| 229|Caenorhabditis elegans Hypothetical ... 27 8.3
AC199158-5|ABO33288.1| 229|Caenorhabditis elegans Hypothetical ... 27 8.3
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 161 bits (392), Expect = 2e-40
Identities = 77/88 (87%), Positives = 80/88 (90%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R IDIALWKFET+KYY+TIIDAPG RDFIKNMITGTSQADCAVL+VA GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS 128
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
KNGQTREHALLA TLGVKQLIV NKMD
Sbjct: 129 KNGQTREHALLAQTLGVKQLIVACNKMD 156
Score = 146 bits (353), Expect = 1e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 161 bits (392), Expect = 2e-40
Identities = 77/88 (87%), Positives = 80/88 (90%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R IDIALWKFET+KYY+TIIDAPG RDFIKNMITGTSQADCAVL+VA GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS 128
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
KNGQTREHALLA TLGVKQLIV NKMD
Sbjct: 129 KNGQTREHALLAQTLGVKQLIVACNKMD 156
Score = 146 bits (353), Expect = 1e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 151 bits (366), Expect = 3e-37
Identities = 71/81 (87%), Positives = 75/81 (92%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R IDIALWKFET+KYY+TIIDAPG RDFIKNMITGTSQADCAVL+VA GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS 128
Query: 425 KNGQTREHALLAFTLGVKQLI 487
KNGQTREHALLA TLGVKQL+
Sbjct: 129 KNGQTREHALLAQTLGVKQLV 149
Score = 146 bits (353), Expect = 1e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 146 bits (353), Expect = 1e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 93.1 bits (221), Expect = 1e-19
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVA 391
R IDIALWKFET+KYY+TIIDAPG RDFIKNMITGTSQADCAVL+VA
Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 2e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAER 243
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 110 bits (265), Expect = 5e-25
Identities = 53/91 (58%), Positives = 65/91 (71%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R +DI FETS + ++DAPG +DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 232 RGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFE 291
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMDPLN 517
GQT+EHALL +LGV QLIV VNK+D ++
Sbjct: 292 NGGQTKEHALLLRSLGVTQLIVAVNKLDTVD 322
Score = 83.0 bits (196), Expect = 1e-16
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +1
Query: 52 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 232 KAERE 246
+ ERE
Sbjct: 227 EEERE 231
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 110 bits (265), Expect = 5e-25
Identities = 53/91 (58%), Positives = 65/91 (71%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R +DI FETS + ++DAPG +DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 250 RGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFE 309
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMDPLN 517
GQT+EHALL +LGV QLIV VNK+D ++
Sbjct: 310 NGGQTKEHALLLRSLGVTQLIVAVNKLDTVD 340
Score = 83.0 bits (196), Expect = 1e-16
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +1
Query: 52 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 232 KAERE 246
+ ERE
Sbjct: 245 EEERE 249
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 100 bits (239), Expect = 7e-22
Identities = 44/84 (52%), Positives = 60/84 (71%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
+++ FET K + TI+DAPG + F+ NMI G +QAD AVL+++A GEFE G + GQ
Sbjct: 175 VEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQ 234
Query: 437 TREHALLAFTLGVKQLIVGVNKMD 508
TREH++L T GVK L++ VNKMD
Sbjct: 235 TREHSMLVKTAGVKHLVILVNKMD 258
Score = 79.0 bits (186), Expect = 2e-15
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +1
Query: 46 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 225
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 226 KLKAERE 246
ERE
Sbjct: 164 TNDEERE 170
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 66.1 bits (154), Expect = 1e-11
Identities = 38/88 (43%), Positives = 51/88 (57%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R I++A +E+ + D PG DFIKNMI GTSQ D AVL++AA G E
Sbjct: 92 RGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME---- 147
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
QT+EH +LA +GVK + + +NK D
Sbjct: 148 ---QTKEHLILAKQVGVKNMAIFINKAD 172
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTT 114
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 66.1 bits (154), Expect = 1e-11
Identities = 38/88 (43%), Positives = 51/88 (57%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R I++A +E+ + D PG DFIKNMI GTSQ D AVL++AA G E
Sbjct: 92 RGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME---- 147
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
QT+EH +LA +GVK + + +NK D
Sbjct: 148 ---QTKEHLILAKQVGVKNMAIFINKAD 172
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTT 114
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 62.9 bits (146), Expect = 1e-10
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +2
Query: 275 KFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 454
++ET+K + ID PG D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 106 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 158
Query: 455 LAFTLGV--KQLIVGVNKMD 508
LA +GV ++V +NK+D
Sbjct: 159 LARQVGVPLDNIVVFMNKVD 178
Score = 36.3 bits (80), Expect = 0.014
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 219
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 220 LDKLKAER 243
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 62.9 bits (146), Expect = 1e-10
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +2
Query: 275 KFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 454
++ET+K + ID PG D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 455 LAFTLGV--KQLIVGVNKMD 508
LA +GV ++V +NK+D
Sbjct: 160 LARQVGVPLDNIVVFMNKVD 179
Score = 36.3 bits (80), Expect = 0.014
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 219
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 220 LDKLKAER 243
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 62.9 bits (146), Expect = 1e-10
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +2
Query: 275 KFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 454
++ET+K + ID PG D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 455 LAFTLGV--KQLIVGVNKMD 508
LA +GV ++V +NK+D
Sbjct: 160 LARQVGVPLDNIVVFMNKVD 179
Score = 36.3 bits (80), Expect = 0.014
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 219
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 220 LDKLKAER 243
L+ A+R
Sbjct: 106 LEYETAKR 113
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.1 bits (82), Expect = 0.008
Identities = 28/73 (38%), Positives = 33/73 (45%)
Frame = +2
Query: 299 VTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 478
VT +D PG F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 479 QLIVGVNKMDPLN 517
QL+V VNK+D N
Sbjct: 258 QLVVAVNKIDKPN 270
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 34.7 bits (76), Expect = 0.041
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +2
Query: 299 VTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 478
+ +ID PG I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 479 QLIVGVNKMD 508
++I+ +NK D
Sbjct: 127 RVIIVLNKCD 136
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 64 INIVVIGHVDSGKSTTT 114
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.055
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.096
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 501 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 373
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGID 147
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.3 bits (70), Expect = 0.22
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 183
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
Score = 31.1 bits (67), Expect = 0.51
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +2
Query: 293 YYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 472
Y + +ID PG DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 473 VKQLIVGVNKMD 508
+ Q+I +NK+D
Sbjct: 155 I-QIIPVINKID 165
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.29
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 239 SVRWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTG 403
S++ P+ I + Y + IID PG +F M AD V++V A G
Sbjct: 183 SIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.29
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 239 SVRWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTG 403
S++ P+ I + Y + IID PG +F M AD V++V A G
Sbjct: 58 SIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.51
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 19 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 129
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.51
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 19 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 129
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 64 INIVVIGHVDSGKSTTT 114
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
protein Y105E8A.26b protein.
Length = 1133
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 275 SREQYRLDTTSRSAFSLSNTQAYLKDPLP 189
S Q+RLD T+ S F SN Q +P+P
Sbjct: 843 SNMQHRLDNTTPSNFDFSNVQPSNSNPVP 871
>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
protein Y105E8A.26a protein.
Length = 1172
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 275 SREQYRLDTTSRSAFSLSNTQAYLKDPLP 189
S Q+RLD T+ S F SN Q +P+P
Sbjct: 882 SNMQHRLDNTTPSNFDFSNVQPSNSNPVP 910
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 142 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEREVVSNRYCSLEVRN 285
+DK ++ KE E+ K KYA KLK + + V N Y S+ +N
Sbjct: 188 LDKSRVKTASKERNELAK---KYAEQNAKLKLKLKEVKNNYASMLEKN 232
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 299 VTIIDAPGDRDFI--KNMITGTSQADCAVLIVAA 394
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z67755-4|CAA91757.1| 336|Caenorhabditis elegans Hypothetical
protein F54F7.4 protein.
Length = 336
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 325 VPRSINDGNIVLASFELPESNIDWIPPHAQPLVCPIPKHI*RILY 191
VPR D ++ + P + +WIPP+ P + IPK + Y
Sbjct: 262 VPRRPLDYYNIIPNLSPPPEDFNWIPPNEPPPI-EIPKEAYELFY 305
>Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 191 VKDPSNMLGYWTN*RLSVRWYPIDIALWKFETSKYYV--TIIDAPGDRDFIK 340
V DP+ + G WT + W ++ KF + V T++DA G +K
Sbjct: 342 VYDPTKLAGEWTQDPETKSWSHSEVEFNKFNPERPLVLDTVLDAIGKTPLVK 393
>Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 191 VKDPSNMLGYWTN*RLSVRWYPIDIALWKFETSKYYV--TIIDAPGDRDFIK 340
V DP+ + G WT + W ++ KF + V T++DA G +K
Sbjct: 342 VYDPTKLAGEWTQDPETKSWSHSEVEFNKFNPERPLVLDTVLDAIGKTPLVK 393
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 27.1 bits (57), Expect = 8.3
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +2
Query: 305 IIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 484
IID PG F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 485 IVGVNKMDPL 514
++ +NK+D L
Sbjct: 605 VIALNKIDRL 614
>AC199158-9|ABO33285.1| 229|Caenorhabditis elegans Hypothetical
protein AC8.12 protein.
Length = 229
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 289 ASFELPESNIDWIPPHAQPLVCPIP 215
+S+E ESN++ +PPH CP P
Sbjct: 189 SSYESEESNMEPLPPHPFYSPCPPP 213
>AC199158-5|ABO33288.1| 229|Caenorhabditis elegans Hypothetical
protein AC8.7 protein.
Length = 229
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 289 ASFELPESNIDWIPPHAQPLVCPIP 215
+S+E ESN++ +PPH CP P
Sbjct: 189 SSYESEESNMEPLPPHPFYSPCPPP 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,973,823
Number of Sequences: 27780
Number of extensions: 244756
Number of successful extensions: 745
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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