Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11031X
(529 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 149 1e-36
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 149 1e-36
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 149 1e-36
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 149 1e-36
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 97 6e-21
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 89 1e-18
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 64 4e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 62 2e-10
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 37 0.010
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 37 0.010
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.017
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.017
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 34 0.051
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 34 0.068
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.16
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.16
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 30 1.1
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 29 1.9
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.9
At2g42320.1 68415.m05238 nucleolar protein gar2-related contains... 29 2.6
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 28 3.4
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 28 3.4
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 28 4.5
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 28 4.5
At5g22370.1 68418.m02610 ATP-binding family protein contains Pfa... 27 5.9
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 27 5.9
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 27 5.9
At5g27540.1 68418.m03297 GTP-binding protein-related low similar... 27 7.8
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 149 bits (361), Expect = 1e-36
Identities = 71/88 (80%), Positives = 77/88 (87%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R IDIALWKFET+KYY T+IDAPG RDFIKNMITGTSQADCAVLI+ + TG FEAGIS
Sbjct: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
K+GQTREHALLAFTLGVKQ+I NKMD
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMD 156
Score = 130 bits (313), Expect = 7e-31
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 149 bits (361), Expect = 1e-36
Identities = 71/88 (80%), Positives = 77/88 (87%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R IDIALWKFET+KYY T+IDAPG RDFIKNMITGTSQADCAVLI+ + TG FEAGIS
Sbjct: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
K+GQTREHALLAFTLGVKQ+I NKMD
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMD 156
Score = 130 bits (313), Expect = 7e-31
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 149 bits (361), Expect = 1e-36
Identities = 71/88 (80%), Positives = 77/88 (87%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R IDIALWKFET+KYY T+IDAPG RDFIKNMITGTSQADCAVLI+ + TG FEAGIS
Sbjct: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
K+GQTREHALLAFTLGVKQ+I NKMD
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMD 156
Score = 130 bits (313), Expect = 7e-31
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 149 bits (361), Expect = 1e-36
Identities = 71/88 (80%), Positives = 77/88 (87%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R IDIALWKFET+KYY T+IDAPG RDFIKNMITGTSQADCAVLI+ + TG FEAGIS
Sbjct: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMD 508
K+GQTREHALLAFTLGVKQ+I NKMD
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMD 156
Score = 130 bits (313), Expect = 7e-31
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 97.1 bits (231), Expect = 6e-21
Identities = 47/95 (49%), Positives = 62/95 (65%)
Frame = +2
Query: 224 TN*RLSVRWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTG 403
TN ++ +++ FET TI+DAPG + ++ NMI+G SQAD VL+++A G
Sbjct: 156 TNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 215
Query: 404 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 508
EFE G + GQTREH LA TLGV +LIV VNKMD
Sbjct: 216 EFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMD 250
Score = 68.1 bits (159), Expect = 3e-12
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +1
Query: 52 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 232 KAER 243
+ ER
Sbjct: 158 EEER 161
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 89.4 bits (212), Expect = 1e-18
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R + +A+ F + +++V ++D+PG +DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 301 RGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFD 360
Query: 425 K-NGQTREHALLAFTLGVKQLIVGVNKMD 508
GQTREHA + GV+Q+IV +NKMD
Sbjct: 361 NLKGQTREHARVLRGFGVEQVIVAINKMD 389
Score = 77.4 bits (182), Expect = 6e-15
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = +1
Query: 58 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 238 ERE 246
ERE
Sbjct: 298 ERE 300
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 64.5 bits (150), Expect = 4e-11
Identities = 34/91 (37%), Positives = 52/91 (57%)
Frame = +2
Query: 245 RWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 424
R I+ A ++ET + +D PG D++KNMITG +Q D A+L+V+ G
Sbjct: 126 RGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP---- 181
Query: 425 KNGQTREHALLAFTLGVKQLIVGVNKMDPLN 517
QT+EH LLA +GV ++V +NK D ++
Sbjct: 182 ---QTKEHILLAKQVGVPDMVVFLNKEDQVD 209
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 40 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 174
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 62.1 bits (144), Expect = 2e-10
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +2
Query: 275 KFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 454
++ET+K + +D PG D++KNMITG +Q D +L+V+ G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 455 LAFTLGVKQLIVGVNKMD 508
LA +GV L+ +NK+D
Sbjct: 177 LARQVGVPSLVCFLNKVD 194
Score = 32.7 bits (71), Expect = 0.16
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTT 114
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 36.7 bits (81), Expect = 0.010
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 284 TSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 463
T + +V+ +D PG + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 464 TLGVKQLIVGVNKMDPLN 517
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 36.7 bits (81), Expect = 0.010
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 284 TSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 463
T + +V+ +D PG + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 464 TLGVKQLIVGVNKMDPLN 517
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +2
Query: 236 LSVRWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTG 403
+S++ P+ + L + Y I+D PG +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +2
Query: 236 LSVRWYPIDIALWKFETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTG 403
+S++ P+ + L + Y I+D PG +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 34.3 bits (75), Expect = 0.051
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +2
Query: 278 FETSKY----YVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 445
FE SK +V+ +D PG + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 446 HALLAFTLGVKQLIVGVNKMD 508
H + +K +I+ NK+D
Sbjct: 166 HLAAVEIMQLKHIIILQNKID 186
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 33.9 bits (74), Expect = 0.068
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +2
Query: 296 YVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 475
+V+ +D PG + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 476 KQLIVGVNKMD 508
K +I+ NK+D
Sbjct: 174 KDIIIIQNKID 184
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGG 141
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 293 YYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTG 403
Y + +ID+PG DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.16
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCG 138
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = +2
Query: 281 ETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 460
E S Y + +ID PG DF + S A+L+V A G QT + LA
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLA 183
Query: 461 FTLGVKQLIVGVNKMD 508
F + ++ +NK+D
Sbjct: 184 FEANL-TIVPVINKID 198
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 31 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 150
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 299 VTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTG 403
+T +D PG F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At2g42320.1 68415.m05238 nucleolar protein gar2-related contains
weak similarity to Swiss-Prot:P41891 protein gar2
[Schizosaccharomyces pombe]
Length = 669
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 343 VLDEISVPRSINDGNIVLASFELPESNIDWIPP 245
VL+E++ SI D + ASF S++ ++PP
Sbjct: 568 VLEELNAAESIGDRKLSEASFPYAASSVSYMPP 600
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 165
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 278 FETSKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTG 403
+E + + + +ID PG DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 343 VLDEISVPRSINDGNIVLASFELPES 266
VLDE P+ +NDG + + ELP +
Sbjct: 84 VLDEFGSPKVVNDGVTIARAIELPNA 109
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 293 YYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 448
Y V IID PG DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 293 YYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 448
Y V IID PG DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
>At5g22370.1 68418.m02610 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 291
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -1
Query: 340 LDEISVPRSINDGNIVLASFELPESNIDWIPPHAQPLVCPIPKHI*RILYPFPG 179
L+++ S+ ++ E E NIDW+ +PL + H IL+ FPG
Sbjct: 59 LEDVMSEHSLGPNGGLVYCMEYLEKNIDWLESKLKPL---LKDHY--ILFDFPG 107
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 27.5 bits (58), Expect = 5.9
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +2
Query: 305 IIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 484
+ID PG F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 485 IVGVNKMDPL 514
I+ +NK+D L
Sbjct: 757 IIALNKVDRL 766
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 27.5 bits (58), Expect = 5.9
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 299 VTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 478
+ +ID PG F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 479 QLIVGVNKMDPL 514
I+ +NK+D L
Sbjct: 611 -FIIALNKVDRL 621
>At5g27540.1 68418.m03297 GTP-binding protein-related low similarity
to Mig-2-like GTPase Mtl [Drosophila melanogaster]
GI:7271872; contains Pfam profile PF00036: EF hand
Length = 648
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 287 SKYYVTIIDAPGDRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 421
++Y +D PG ++ ++ G + LIVAA T F +
Sbjct: 2 ARYAAGAVDCPGSPKSVRIVVVGDKGTGKSSLIVAAATDSFPPNV 46
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,378,531
Number of Sequences: 28952
Number of extensions: 232158
Number of successful extensions: 717
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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