Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11029
(596 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 113 2e-26
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 112 3e-26
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 86 3e-18
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 63 3e-11
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 61 1e-10
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 33 0.032
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.042
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.13
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.22
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 0.22
SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.39
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 29 0.52
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.52
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 29 0.52
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.90
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 28 1.2
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 28 1.2
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 1.6
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 27 1.6
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 27 1.6
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 2.1
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.1
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 2.1
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 27 2.7
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.7
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 27 2.7
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 27 2.7
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 2.7
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 26 3.6
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.6
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 3.6
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 3.6
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 3.6
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 4.8
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 26 4.8
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 4.8
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 6.3
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 6.3
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 25 6.3
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 6.3
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 8.4
SPAC25B8.08 |||conserved fungal family|Schizosaccharomyces pombe... 25 8.4
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 8.4
SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Ma... 25 8.4
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 113 bits (271), Expect = 2e-26
Identities = 53/99 (53%), Positives = 74/99 (74%)
Frame = +1
Query: 4 SVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 183
+VSA+EK T K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY
Sbjct: 485 NVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYA 544
Query: 184 FSMKSTMEDEKLKEKISDSDKQTISTSATTPSSGWIPTS 300
+S++++++D LK+K+ SDK+T+ A + W+ ++
Sbjct: 545 YSLRNSLDDPNLKDKVDASDKETVD-KAVKETIEWLDSN 582
Score = 55.6 bits (128), Expect = 5e-09
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +3
Query: 255 LDKC-NDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 380
+DK +TI+WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 568 VDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 112 bits (270), Expect = 3e-26
Identities = 53/96 (55%), Positives = 72/96 (75%)
Frame = +1
Query: 4 SVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 183
+VSA+EK T K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY
Sbjct: 485 NVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYA 544
Query: 184 FSMKSTMEDEKLKEKISDSDKQTISTSATTPSSGWI 291
+S++++++D LK+K+ SDK+ I A + W+
Sbjct: 545 YSLRNSLDDPNLKDKVDASDKEAID-KAVKETIEWL 579
Score = 58.4 bits (135), Expect = 7e-10
Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +3
Query: 255 LDKC-NDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 380
+DK +TI+WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 568 IDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 86.2 bits (204), Expect = 3e-18
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 SVSAIEKS-TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 180
+VSA++KS K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y
Sbjct: 514 TVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENY 573
Query: 181 CFSMKSTM-EDEKLKEKISDSDKQTI 255
+S+K +DE+L K+ DKQ +
Sbjct: 574 AYSLKGQFDDDEQLGGKVDPEDKQAV 599
Score = 35.9 bits (79), Expect = 0.004
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 LDKCNDTIKWLDSN-QLADKEEYEHKQKELEGIYNPIITKMY 377
LD D +WL+ + + A KEE+E ++++L+ + +PI K+Y
Sbjct: 600 LDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 63.3 bits (147), Expect = 3e-11
Identities = 28/83 (33%), Positives = 51/83 (61%)
Frame = +1
Query: 7 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCF 186
V+A+EK+T + I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY
Sbjct: 491 VTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYIS 550
Query: 187 SMKSTMEDEKLKEKISDSDKQTI 255
++++T+ + + K+ DK I
Sbjct: 551 NIETTISEPNVMMKLKRGDKSKI 573
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 60.9 bits (141), Expect = 1e-10
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = +1
Query: 4 SVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 183
+VSA +K+TNK++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C
Sbjct: 528 NVSARDKATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVC 586
Query: 184 FSMKSTMEDEKLK 222
++S ++ K K
Sbjct: 587 TDIESNLDIHKDK 599
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 33.1 bits (72), Expect = 0.032
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Frame = +1
Query: 4 SVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET----IQAKNAL 171
+++ ++K+ N+E +I K +L EE ++ ++A+K N D++++ I K L
Sbjct: 232 AIAYLKKTFNEELQIR----KNKLDNEEWDKAFSDAKKLSNMKDREEKLYIVPIDPKPIL 287
Query: 172 ESYCFSMKSTMEDEKLKEKISDSDKQTISTSATTPSSGWIPTSWPTRRSMSTSRKN 339
+ + E++ +D +K+ SS +IP S PT++ T KN
Sbjct: 288 RAQAIPRRIQPEEQ------ADYEKELNDHVNIVKSSTYIPISIPTQKQKPTLPKN 337
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.7 bits (71), Expect = 0.042
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 22 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKS 198
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 199 TMED 210
++D
Sbjct: 593 KLDD 596
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.1 bits (67), Expect = 0.13
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +1
Query: 31 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 210
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 211 EKLKEKISD 237
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.22
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 76 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 255
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D +
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDVKLK 1664
Query: 256 STSATT 273
A T
Sbjct: 1665 KVVAET 1670
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.3 bits (65), Expect = 0.22
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +1
Query: 19 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQA-KNALESYCFSMK 195
+K TN E+ + + ++ + + +K + +K KE + + K +L S K
Sbjct: 187 KKLTNMESNFSAKQSEAYDLSRQLLTVTEKLDKKEKDYEKIKEDVSSIKASLAEEQASNK 246
Query: 196 STMEDEKLKEKISDSDKQTISTSATTPSS 282
S +++ EK+ S +T+ST T +S
Sbjct: 247 SLRGEQERLEKLLVSSNKTVSTLRQTENS 275
>SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 29.5 bits (63), Expect = 0.39
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 196 STMEDEKLKEKISDSDKQTISTSATTPSSGWIPTSWPTRRSM 321
S E ++K++ +D D S S++T S+G IP S PT R +
Sbjct: 8 SVSETPEVKQEDNDEDLDAYSWSSSTDSAGEIP-SLPTNRKI 48
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 29.1 bits (62), Expect = 0.52
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +1
Query: 82 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 255
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTL 76
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.52
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 64 KGRLSKEEIERMVNEAEKYRNEDD 135
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 29.1 bits (62), Expect = 0.52
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +1
Query: 151 IQAKNA-LESYCFSMKS---TMEDEKLKEKISDSDKQTISTSATTPSSGWIPTSW 303
+QA+ A LESY ++ T+ + K+++++SD KQ ++ +G T W
Sbjct: 114 LQARKANLESYRAKLEKEYKTLAENKIQQRLSDGTKQLVTIDGLQYITGVSDTKW 168
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 28.3 bits (60), Expect = 0.90
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Frame = +1
Query: 79 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 231
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 232 SDSDKQTIST 261
K +IST
Sbjct: 547 PSRFKTSIST 556
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 27.9 bits (59), Expect = 1.2
Identities = 19/99 (19%), Positives = 47/99 (47%)
Frame = +1
Query: 46 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 225
+ + +D + EE+ M + ++ ++E K T+ + +E ++ +++ +++E
Sbjct: 75 VCLQDDLAAATPEELAEMEKQIQELKDEVSVVK-TLYKEKCIELQ--ALNNSLSPAEIRE 131
Query: 226 KISDSDKQTISTSATTPSSGWIPTSWPTRRSMSTSRKNW 342
KI DK+ TS+ S ++ +M + KN+
Sbjct: 132 KIQSIDKEIEETSSKLESLRNGTVKQISKEAMQKTDKNY 170
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 27.9 bits (59), Expect = 1.2
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +1
Query: 1 TSVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ------KETIQAK 162
+S S EK + K+ + N K SKE I ++ N + DD+ E A
Sbjct: 160 SSFSPPEKPSMKDLALFHGN-KSPSSKETIPKVSNSNSSDTSTDDQAYLNVSVSENEHAD 218
Query: 163 NALESYCFSMKSTMEDEKLKEKISDSDKQTISTSATTPSSGWIPTSWPTRRSMSTSRKNW 342
+++++ S + +K ++D+ + I +T G + T+ + + SRK
Sbjct: 219 RSIKTH--SSAPPLNQQKSSTSVNDAVSKAIQLVKSTSDLGSLSTNTSSTAQKNKSRKPT 276
Query: 343 KAFT 354
K+F+
Sbjct: 277 KSFS 280
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +1
Query: 79 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIS 258
+EE E+ + E K R + DK++E + + LE + + + K+ + + + S
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 259 TSATTPS 279
TT S
Sbjct: 754 DGCTTSS 760
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 7 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 132
VS ++S K + + K EE+E VNE E++R D
Sbjct: 259 VSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 27.5 bits (58), Expect = 1.6
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 1 TSVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALE 174
T+V +TNK N + N L EEI V + E + DD+ + E +A ++ E
Sbjct: 38 TTVKGQVANTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDE 97
Query: 175 SYCF 186
Y F
Sbjct: 98 RYLF 101
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.1 bits (57), Expect = 2.1
Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 82 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIS 258
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 259 TSATTPSSGWIPTSWPTRRSMSTSRKNWKAFTI 357
++ + +++T RK W T+
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRKLWPQSTL 582
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/97 (18%), Positives = 42/97 (43%)
Frame = +1
Query: 13 AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSM 192
AIE+ N+E ++ + ++ R EEI+ ++ +++ +++ +E+
Sbjct: 520 AIERRRNEEEELARSRERARKKAEEIKISSSKMNSSPTITNERSSNVESSKKVEA--IYT 577
Query: 193 KSTMEDEKLKEKISDSDKQTISTSATTPSSGWIPTSW 303
K E + S+++T ++P P SW
Sbjct: 578 KEPQSITNSPEGL-HSNQETTEIDPSSPRDDSTPLSW 613
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 97 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 201
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.6 bits (56), Expect = 2.7
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = +1
Query: 10 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 189
S+I+K K T+ + + E+ + E EK + +A+ A
Sbjct: 206 SSIQKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQ 265
Query: 190 MKSTMEDEKLKEKISDSDKQTISTS 264
+ +E EK KEK D D++ + S
Sbjct: 266 NSAKLEKEKAKEKQKDKDQEQDTVS 290
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 2.7
Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Frame = +1
Query: 1 TSVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 180
+S S+ S++ + I ++ S ++ + + TI + ++ S
Sbjct: 257 SSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSS 316
Query: 181 CFSM--KSTMEDEKLKEKISDSDKQTISTSATTPSSGWIPTSWPTRRSMST 327
S S+M S TIS+S+++PSS ++ + +S S+
Sbjct: 317 FSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSS 367
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 157 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTISTSATTPSSGWIPTS 300
A N E+Y ++ ++ + +S+S TISTS++TP + +PTS
Sbjct: 65 ASNTSENYPYTGSKSLSSSSI---LSNS---TISTSSSTPITASVPTS 106
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +1
Query: 7 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 168
V A+ KS +++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 37 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 207
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 26.2 bits (55), Expect = 3.6
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +1
Query: 19 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 198
EK +KE K ++ + E V ++ NE+D+Q E IQ Y +++S
Sbjct: 36 EKKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQ-EAIQ-------YYINVES 87
Query: 199 TMEDEKLKEKISDSDK 246
DE L ++ DS +
Sbjct: 88 QDADETLHQEAQDSSE 103
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 82 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 252
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 58 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 234
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 235 DSDKQT 252
+D+ T
Sbjct: 695 -TDRLT 699
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 388 EESPEVCRASRAEHPEPE 441
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 76 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 198
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 64 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 174
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 4.8
Identities = 34/162 (20%), Positives = 55/162 (33%), Gaps = 2/162 (1%)
Frame = +1
Query: 10 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 189
+ I+ ++ K +E E AE+ N + ++E Q K A+E +
Sbjct: 768 NVIDAERERQRKEIFEQKLAEAIREAEEEAARAAEEEANRELHEQEEAQ-KRAIEERTRA 826
Query: 190 MKSTMEDEKLKEKISDSDKQTISTSATTPSSGWIPTSWPTRRSMSTSRKNWKAFTIR*LR 369
+ E E+ + ++ I S + RR+ + R
Sbjct: 827 AREAKEREQREMAEKLERQRRIQQERDEEISRKLAEKAAARRANIGASSPSPGAWRRGGA 886
Query: 370 RCTRVPEESPEVCRA--SRAEHPEPEVPPPGLEALAPPSRRS 489
V +SP R SR P E P A PPSRR+
Sbjct: 887 SAGGVSRDSPRYSRGGYSRGSVPPRETLAPSKGAYVPPSRRN 928
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 64 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 213
+GR + + N+ E + DDKQ + KN+LE+ M+ + E
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIE 1308
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/73 (21%), Positives = 38/73 (52%)
Frame = +1
Query: 25 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 204
ST+ + + DK + E+I + ++Y NED+ + +++ A S+ ++ +T+
Sbjct: 387 STSLPSTEPVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPAAVSFS-TITNTI 445
Query: 205 EDEKLKEKISDSD 243
+ + KI +S+
Sbjct: 446 QAKYSNRKIKNSN 458
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 6.3
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 40 NKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 216
NK+ + G + + E E EAE ++ ++D+ ++E ++ L S S E+E+
Sbjct: 187 NKVLAARE-GLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEE 245
Query: 217 LKEKISDSDK 246
E SD D+
Sbjct: 246 SSESESDEDE 255
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +1
Query: 52 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 231
+ +K SKE ++ EAE+ E +E + + + S K +++ LK K
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE--LKAKA 490
Query: 232 SDSDKQTISTSA 267
D++++ T A
Sbjct: 491 EDAERRNDFTLA 502
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 22 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 150
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 25.0 bits (52), Expect = 8.4
Identities = 27/128 (21%), Positives = 48/128 (37%)
Frame = +1
Query: 118 YRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTISTSATTPSSGWIPT 297
+ + K+K T + ++ + S+ + +KI+D K+ I SA P
Sbjct: 344 HESSRSKKKHTGPSLSSASQPSAASSSSSSEPSNLDKINDV-KKNIEVSANEPQPR---- 398
Query: 298 SWPTRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAPP 477
P + + S+ + T + T P+E E ++ E PP E P
Sbjct: 399 --PVKEDVPKSQVGGETDTTDVINNST--PKEETEESPSTELPETGKEQPPNKAEPAVPT 454
Query: 478 SRRSIKPT 501
S KP+
Sbjct: 455 EASSTKPS 462
>SPAC25B8.08 |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 590
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 208 DEKLKEKISDSDKQTIS 258
+EKL+EKI+ SDK +S
Sbjct: 480 EEKLREKINSSDKGDVS 496
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 73 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK---ISDSD 243
++K + + +AEK R ED+++K Q ++ L+S+ K +K + ISD D
Sbjct: 213 IAKSKHYKAERQAEKERYEDEREKLDEQMED-LQSFLSDYKKASRKSGIKTQRPIISDGD 271
>SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 205 EDEKLKEKISDSDKQTISTSATTPSSGW 288
ED + K+SD KQ IST +T W
Sbjct: 97 EDTGHESKVSDQVKQVISTPMSTCFEQW 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.128 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,056,751
Number of Sequences: 5004
Number of extensions: 38216
Number of successful extensions: 237
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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