Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11028
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical p...    30   1.8  
AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical ...    30   1.8  
U40933-2|AAL27242.1|  158|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin prot...    27   9.6  

>Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 178 IKYEGVCSHRCLSGSGCAGRGRLMLSNVDQGCRRTLSLPHCSAYYGQ 318
           +K+ G   H C+ GSG     R      DQ   RT+S+  CS  +G+
Sbjct: 182 LKHSGRLGHSCVYGSGTWSERRQYEEPFDQVSERTISI--CSTGHGE 226


>AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 178 IKYEGVCSHRCLSGSGCAGRGRLMLSNVDQGCRRTLSLPHCSAYYGQ 318
           +K+ G   H C+ GSG     R      DQ   RT+S+  CS  +G+
Sbjct: 182 LKHSGRLGHSCVYGSGTWSERRQYEEPFDQVSERTISI--CSTGHGE 226


>U40933-2|AAL27242.1|  158|Caenorhabditis elegans Hypothetical
           protein F20D12.7 protein.
          Length = 158

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 456 EELRESFPVRLVVVEVGGRQEIMVGTFQIQ*G 361
           EE+ E   V LV++ +GGR   +VGT ++  G
Sbjct: 87  EEITEPSSVLLVMITMGGRMANVVGTMKLYKG 118


>AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin protein
           2 protein.
          Length = 170

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 364 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIK-HALRG 519
           ++ L  SY YL  + YF+         AK F++ SD+  E    L++   LRG
Sbjct: 21  NIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHATELMRVQNLRG 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,895,341
Number of Sequences: 27780
Number of extensions: 303897
Number of successful extensions: 786
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)