Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11024
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.31 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   6.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 716 VLLWISYFLKVGTHC 760
           +LLWIS+FL    HC
Sbjct: 142 ILLWISFFLNFMLHC 156


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 621  QLFIFITIYCNRKRLFPSEFNI 686
            Q+F  IT  C+ +  FPS+  I
Sbjct: 1102 QIFGLITFGCSNRCFFPSKIRI 1123



 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +3

Query: 609 YLKY-QLFIFITIYCNRKRLFPSEFNIL 689
           YL++ Q+F F+T  C R     S+  IL
Sbjct: 17  YLQHNQIFGFVTFTCTRSNFRSSKLLIL 44


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +3

Query: 609 YLKY-QLFIFITIYCNRKRLFPSEFNIL 689
           YL++ Q+F F+T  C R     S+  IL
Sbjct: 35  YLQHNQIFGFVTFTCTRSNFRSSKLLIL 62


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 709 TKQHY*SRILNSEGNNL 659
           TK HY     N +GN L
Sbjct: 342 TKNHYSKNTYNEQGNKL 358


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 709 TKQHY*SRILNSEGNNL 659
           TK HY     N +GN L
Sbjct: 234 TKNHYSKNTYNEQGNKL 250


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 510 AYFVESSNNN 481
           AYF+E SNNN
Sbjct: 96  AYFLEVSNNN 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,083
Number of Sequences: 336
Number of extensions: 3674
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)