Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11024
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70271-1|CAB61041.1| 393|Caenorhabditis elegans Hypothetical pr... 69 5e-12
AF103732-1|AAD03603.1| 393|Caenorhabditis elegans Wnt homolog p... 69 5e-12
Z68301-1|CAA92624.1| 360|Caenorhabditis elegans Hypothetical pr... 67 2e-11
X72943-1|CAA51448.1| 360|Caenorhabditis elegans Wnt-2 protein p... 66 2e-11
U41996-3|AAA83472.2| 362|Caenorhabditis elegans More of ms prot... 65 5e-11
AF013952-1|AAC47749.1| 362|Caenorhabditis elegans mom-2 protein. 65 5e-11
X72941-1|CAA51446.1| 372|Caenorhabditis elegans Wnt-1 protein p... 62 5e-10
AF025463-5|AAB71011.1| 372|Caenorhabditis elegans C. elegans wn... 62 5e-10
U22184-1|AAA64847.1| 348|Caenorhabditis elegans Wnt protein pro... 60 2e-09
U22179-1|AAA64846.1| 348|Caenorhabditis elegans Wnt protein pro... 60 2e-09
AC006627-2|AAT68899.1| 169|Caenorhabditis elegans Abnormal cell... 60 2e-09
AC006627-1|AAK85460.1| 348|Caenorhabditis elegans Abnormal cell... 60 2e-09
AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical ... 28 9.2
>Z70271-1|CAB61041.1| 393|Caenorhabditis elegans Hypothetical
protein W08D2.1 protein.
Length = 393
Score = 68.5 bits (160), Expect = 5e-12
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +1
Query: 1 DGCETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLC 141
+ C+ LCCGRGY+T + +T+C C+F WCC V C C V H C
Sbjct: 346 ESCDLLCCGRGYNTRLEIRQTQCECKFVWCCEVKCKTCTEEVAVHTC 392
>AF103732-1|AAD03603.1| 393|Caenorhabditis elegans Wnt homolog
protein.
Length = 393
Score = 68.5 bits (160), Expect = 5e-12
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +1
Query: 1 DGCETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLC 141
+ C+ LCCGRGY+T + +T+C C+F WCC V C C V H C
Sbjct: 346 ESCDLLCCGRGYNTRLEIRQTQCECKFVWCCEVKCKTCTEEVAVHTC 392
>Z68301-1|CAA92624.1| 360|Caenorhabditis elegans Hypothetical
protein W01B6.1 protein.
Length = 360
Score = 66.9 bits (156), Expect = 2e-11
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 1 DGCETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLC 141
+GC++LCCGRGY+T ++KC C+F WCC V C C + +C
Sbjct: 313 EGCDSLCCGRGYNTYTQEVKSKCNCKFEWCCKVVCQTCNNVTQVDIC 359
>X72943-1|CAA51448.1| 360|Caenorhabditis elegans Wnt-2 protein
protein.
Length = 360
Score = 66.5 bits (155), Expect = 2e-11
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 1 DGCETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLC 141
+GC++LCCGRGY+T + KC C+F WCC V C C + +C
Sbjct: 313 EGCDSLCCGRGYNTYTQEVKAKCNCKFEWCCKVVCQTCNNVTQVDIC 359
>U41996-3|AAA83472.2| 362|Caenorhabditis elegans More of ms protein
2 protein.
Length = 362
Score = 65.3 bits (152), Expect = 5e-11
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +1
Query: 1 DGCETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLC 141
+ C +CCGRG+ TTR + + C CQF WCC V C C VE + C
Sbjct: 315 ENCPNICCGRGWRTTREIVDEPCHCQFVWCCEVKCKTCKKLVERNYC 361
>AF013952-1|AAC47749.1| 362|Caenorhabditis elegans mom-2 protein.
Length = 362
Score = 65.3 bits (152), Expect = 5e-11
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +1
Query: 1 DGCETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLC 141
+ C +CCGRG+ TTR + + C CQF WCC V C C VE + C
Sbjct: 315 ENCPNICCGRGWRTTREIVDEPCHCQFVWCCEVKCKTCKKLVERNYC 361
>X72941-1|CAA51446.1| 372|Caenorhabditis elegans Wnt-1 protein
protein.
Length = 372
Score = 62.1 bits (144), Expect = 5e-10
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = +1
Query: 1 DGCETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLC 141
D C LCCGRGY + E KC C+F +CC V C C +E +LC
Sbjct: 325 DDCSLLCCGRGYEKKVQIVEEKCNCKFIYCCEVRCEPCQKRIEKYLC 371
>AF025463-5|AAB71011.1| 372|Caenorhabditis elegans C. elegans wnt
family protein 1,isoform a protein.
Length = 372
Score = 62.1 bits (144), Expect = 5e-10
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = +1
Query: 1 DGCETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLC 141
D C LCCGRGY + E KC C+F +CC V C C +E +LC
Sbjct: 325 DDCSLLCCGRGYEKKVQIVEEKCNCKFIYCCEVRCEPCQKRIEKYLC 371
>U22184-1|AAA64847.1| 348|Caenorhabditis elegans Wnt protein
protein.
Length = 348
Score = 59.7 bits (138), Expect = 2e-09
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +1
Query: 7 CETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLCN*LP 153
C+ LCCG G+S V KC C+F WCCN+ C C+ CN P
Sbjct: 294 CDRLCCGNGFSIRHEVVRVKCDCEFVWCCNLVCKDCIQHRWISTCNGTP 342
>U22179-1|AAA64846.1| 348|Caenorhabditis elegans Wnt protein
protein.
Length = 348
Score = 59.7 bits (138), Expect = 2e-09
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +1
Query: 7 CETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLCN*LP 153
C+ LCCG G+S V KC C+F WCCN+ C C+ CN P
Sbjct: 294 CDRLCCGNGFSIRHEVVRVKCDCEFVWCCNLVCKDCIQHRWISTCNGTP 342
>AC006627-2|AAT68899.1| 169|Caenorhabditis elegans Abnormal cell
lineage protein 44,isoform b protein.
Length = 169
Score = 59.7 bits (138), Expect = 2e-09
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +1
Query: 7 CETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLCN*LP 153
C+ LCCG G+S V KC C+F WCCN+ C C+ CN P
Sbjct: 115 CDRLCCGNGFSIRHEVVRVKCDCEFVWCCNLVCKDCIQHRWISTCNGTP 163
>AC006627-1|AAK85460.1| 348|Caenorhabditis elegans Abnormal cell
lineage protein 44,isoform a protein.
Length = 348
Score = 59.7 bits (138), Expect = 2e-09
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +1
Query: 7 CETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLCN*LP 153
C+ LCCG G+S V KC C+F WCCN+ C C+ CN P
Sbjct: 294 CDRLCCGNGFSIRHEVVRVKCDCEFVWCCNLVCKDCIQHRWISTCNGTP 342
>AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.14 protein.
Length = 468
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 55 EETKCRCQFHWCCNVTCSKCVT--TVETHLC 141
EETKC+ +TCS+C+T TVE C
Sbjct: 271 EETKCQEPVEKIFELTCSECMTKQTVERFRC 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,432,529
Number of Sequences: 27780
Number of extensions: 327909
Number of successful extensions: 803
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -