Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11024
         (815 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           37   2e-04
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           34   0.002
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.6  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   5.9  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   5.9  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   5.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   7.8  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 1   DGCETLCCGRGYSTTRSVEETKCRC 75
           DGC+ +CCGRGY T       +C C
Sbjct: 111 DGCDLMCCGRGYKTQEVTVVERCAC 135


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 1   DGCETLCCGRGYSTTRSVEETKC 69
           DGC+ +CCGRGY T       +C
Sbjct: 112 DGCDLMCCGRGYKTQEVTVVERC 134


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -1

Query: 509 PISLSLPTIT*RLEVDTFSFCPLYKMVPLFSSTLHILNMTCT 384
           P+   L T++   +V   +FC ++    +F+  L I+   CT
Sbjct: 192 PMIAELETLSVEPKVSPMTFCRVFPFHLMFNRDLIIVQTGCT 233


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -1

Query: 509 PISLSLPTIT*RLEVDTFSFCPLYKMVPLFSSTLHILNMTCT 384
           P+   L T++   +V   +FC ++    +F+  L I+   CT
Sbjct: 192 PMIAELETLSVEPKVSPMTFCRVFPFHLMFNRDLIIVQTGCT 233


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 395 CSIYGG*KKRVAPSCIGDKMKKC 463
           C+  G   KRV P  +    KKC
Sbjct: 57  CTAEGNELKRVLPDALATDCKKC 79


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 395 CSIYGG*KKRVAPSCIGDKMKKC 463
           C+  G   KRV P  +    KKC
Sbjct: 57  CTAEGNELKRVLPDALATDCKKC 79


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 395 CSIYGG*KKRVAPSCIGDKMKKC 463
           C+  G   KRV P  +    KKC
Sbjct: 57  CTAEGNELKRVLPDALATDCKKC 79


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +2

Query: 206 AYSVVDSANTALARVSVATLRFEPRELTYTR*GEA 310
           A  + ++++ +  R++ +T   +PR  T+T  GE+
Sbjct: 210 ALIIYNNSDNSFQRLTSSTFASDPRYTTFTINGES 244


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,480
Number of Sequences: 438
Number of extensions: 4158
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)