Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11021
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    32   0.004
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    28   0.065
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    26   0.35 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    26   0.35 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   1.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   7.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   9.8  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +2

Query: 356 WTLFNGEAFDYIGSQRVAYDIKRGVWPPNAPLAPTDVKLHVEIGQIGG 499
           W L + ++F  + SQRV    K G + P+    P DVK  VE  +I G
Sbjct: 274 WHLTDSQSFPLV-SQRVPQLAKNGAYGPDMIYTPEDVKALVEYARIRG 320


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 0.065
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 39  SFMFAAINTEVCMRRSATSTIVTTTKVCDPLGDQNVYYSLFPR--TKESKKQSITLVTAR 212
           +F F  +N+      S +      T V DP  D  +Y +L PR  + ++  +S+  VT  
Sbjct: 55  NFSFGQVNSPPSSTSSGSLGQFPATPVIDPAKDPAIYSNLLPRPGSNDNSWESLIEVTKT 114

Query: 213 IDSASL 230
            +++ L
Sbjct: 115 SETSKL 120


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +2

Query: 347 NILWTLFNGEAFDYIGSQRVAYDIKRGV--WPPNAP 448
           ++ W  +NGEA  Y  S  +AYD +  V  W    P
Sbjct: 109 DVFWNCWNGEASRYQCSPGLAYDREARVCMWADQVP 144


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +2

Query: 347 NILWTLFNGEAFDYIGSQRVAYDIKRGV--WPPNAP 448
           ++ W  +NGEA  Y  S  +AYD +  V  W    P
Sbjct: 109 DVFWNCWNGEASRYQCSPGLAYDREARVCMWADQVP 144


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = +1

Query: 451 GTDRCKTTR*NRPDRWILINY------VNENTWPLNAF 546
           G DR  +   N P +W+L+N+      + + +W +NAF
Sbjct: 290 GIDRADSFNFN-PHKWLLVNFDCSTMWLKDPSWLVNAF 326


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +2

Query: 62  YRSLHEKVSYLNDSNNNESVRSAWRSKRLLFP 157
           + SLH   + +ND+N N+  +   + + +  P
Sbjct: 255 FLSLHPAETSMNDANRNDCAKPLTQIRNIRGP 286


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +1

Query: 547 VPTLAPSTINDG-DNDIQIFLKQLSNAYNMTIPGIFNGSLPTSSIHSF 687
           VP +   T   G DN+  + +K    A    + G+F  S+ T  +H F
Sbjct: 314 VPYMYEDTFWIGYDNEQSVTIKT-EYAKEKNLAGVFIWSIETDDMHEF 360


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 62  YRSLHEKVSYLNDSNNNESVR 124
           + SLH   + +ND+N N+  +
Sbjct: 255 FLSLHPAETSMNDANRNDCAK 275


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,424
Number of Sequences: 336
Number of extensions: 3590
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)