Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11021
(707 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87442-1|BAA13383.1| 708|Homo sapiens KIAA0253 protein. 59 2e-08
BC047621-1|AAH47621.1| 689|Homo sapiens NCSTN protein protein. 59 2e-08
AY359120-1|AAQ89478.1| 709|Homo sapiens ATAG1874 protein. 59 2e-08
AL445230-7|CAI15010.1| 689|Homo sapiens nicastrin protein. 59 2e-08
AL445230-6|CAI15009.1| 709|Homo sapiens nicastrin protein. 59 2e-08
AF240468-1|AAG11412.1| 709|Homo sapiens nicastrin protein. 59 2e-08
AL445230-8|CAI15011.1| 319|Homo sapiens nicastrin protein. 53 1e-06
AL445230-9|CAI15012.1| 219|Homo sapiens nicastrin protein. 45 2e-04
AL445230-5|CAI15008.1| 255|Homo sapiens nicastrin protein. 36 0.19
>D87442-1|BAA13383.1| 708|Homo sapiens KIAA0253 protein.
Length = 708
Score = 58.8 bits (136), Expect = 2e-08
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +3
Query: 18 LCSIQLNSFMFAAINTEVCMRRSATSTI--VTTTKVCDPLGDQNVYYSLFP-RTKESKKQ 188
LC++QL S M A I+T CMRRS+ + + VCDPL D NV+ L P T + K
Sbjct: 211 LCAMQLFSHMHAVISTATCMRRSSIQSTFSINPEIVCDPLSDYNVWSMLKPINTTGTLKP 270
Query: 189 SITLVTA--RIDSASLFDGVSPGA 254
+V A R+DS S F V+PGA
Sbjct: 271 DDRVVVAATRLDSRSFFWNVAPGA 294
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 347 NILWTLFNGEAFDYIGSQRVAYDIKRGVWPPNAPLAPTDVKLHVEIGQI 493
N+++ F GE FDYIGS R+ YD+++G + P+ +V VE+GQ+
Sbjct: 323 NVMFVFFQGETFDYIGSSRMVYDMEKGKF----PVQLENVDSFVELGQV 367
>BC047621-1|AAH47621.1| 689|Homo sapiens NCSTN protein protein.
Length = 689
Score = 58.8 bits (136), Expect = 2e-08
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +3
Query: 18 LCSIQLNSFMFAAINTEVCMRRSATSTI--VTTTKVCDPLGDQNVYYSLFP-RTKESKKQ 188
LC++QL S M A I+T CMRRS+ + + VCDPL D NV+ L P T + K
Sbjct: 192 LCAMQLFSHMHAVISTATCMRRSSIQSTFSINPEIVCDPLSDYNVWSMLKPINTTGTLKP 251
Query: 189 SITLVTA--RIDSASLFDGVSPGA 254
+V A R+DS S F V+PGA
Sbjct: 252 DDRVVVAATRLDSRSFFWNVAPGA 275
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 347 NILWTLFNGEAFDYIGSQRVAYDIKRGVWPPNAPLAPTDVKLHVEIGQI 493
N+++ F GE FDYIGS R+ YD+++G + P+ +V VE+GQ+
Sbjct: 304 NVMFVFFQGETFDYIGSSRMVYDMEKGKF----PVQLENVDSFVELGQV 348
>AY359120-1|AAQ89478.1| 709|Homo sapiens ATAG1874 protein.
Length = 709
Score = 58.8 bits (136), Expect = 2e-08
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +3
Query: 18 LCSIQLNSFMFAAINTEVCMRRSATSTI--VTTTKVCDPLGDQNVYYSLFP-RTKESKKQ 188
LC++QL S M A I+T CMRRS+ + + VCDPL D NV+ L P T + K
Sbjct: 212 LCAMQLFSHMHAVISTATCMRRSSIQSTFSINPEIVCDPLSDYNVWSMLKPINTTGTLKP 271
Query: 189 SITLVTA--RIDSASLFDGVSPGA 254
+V A R+DS S F V+PGA
Sbjct: 272 DDRVVVAATRLDSRSFFWNVAPGA 295
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 347 NILWTLFNGEAFDYIGSQRVAYDIKRGVWPPNAPLAPTDVKLHVEIGQI 493
N+++ F GE FDYIGS R+ YD+++G + P+ +V VE+GQ+
Sbjct: 324 NVMFVFFQGETFDYIGSSRMVYDMEKGKF----PVQLENVDSFVELGQV 368
>AL445230-7|CAI15010.1| 689|Homo sapiens nicastrin protein.
Length = 689
Score = 58.8 bits (136), Expect = 2e-08
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +3
Query: 18 LCSIQLNSFMFAAINTEVCMRRSATSTI--VTTTKVCDPLGDQNVYYSLFP-RTKESKKQ 188
LC++QL S M A I+T CMRRS+ + + VCDPL D NV+ L P T + K
Sbjct: 192 LCAMQLFSHMHAVISTATCMRRSSIQSTFSINPEIVCDPLSDYNVWSMLKPINTTGTLKP 251
Query: 189 SITLVTA--RIDSASLFDGVSPGA 254
+V A R+DS S F V+PGA
Sbjct: 252 DDRVVVAATRLDSRSFFWNVAPGA 275
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 347 NILWTLFNGEAFDYIGSQRVAYDIKRGVWPPNAPLAPTDVKLHVEIGQI 493
N+++ F GE FDYIGS R+ YD+++G + P+ +V VE+GQ+
Sbjct: 304 NVMFVFFQGETFDYIGSSRMVYDMEKGKF----PVQLENVDSFVELGQV 348
>AL445230-6|CAI15009.1| 709|Homo sapiens nicastrin protein.
Length = 709
Score = 58.8 bits (136), Expect = 2e-08
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +3
Query: 18 LCSIQLNSFMFAAINTEVCMRRSATSTI--VTTTKVCDPLGDQNVYYSLFP-RTKESKKQ 188
LC++QL S M A I+T CMRRS+ + + VCDPL D NV+ L P T + K
Sbjct: 212 LCAMQLFSHMHAVISTATCMRRSSIQSTFSINPEIVCDPLSDYNVWSMLKPINTTGTLKP 271
Query: 189 SITLVTA--RIDSASLFDGVSPGA 254
+V A R+DS S F V+PGA
Sbjct: 272 DDRVVVAATRLDSRSFFWNVAPGA 295
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 347 NILWTLFNGEAFDYIGSQRVAYDIKRGVWPPNAPLAPTDVKLHVEIGQI 493
N+++ F GE FDYIGS R+ YD+++G + P+ +V VE+GQ+
Sbjct: 324 NVMFVFFQGETFDYIGSSRMVYDMEKGKF----PVQLENVDSFVELGQV 368
>AF240468-1|AAG11412.1| 709|Homo sapiens nicastrin protein.
Length = 709
Score = 58.8 bits (136), Expect = 2e-08
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +3
Query: 18 LCSIQLNSFMFAAINTEVCMRRSATSTI--VTTTKVCDPLGDQNVYYSLFP-RTKESKKQ 188
LC++QL S M A I+T CMRRS+ + + VCDPL D NV+ L P T + K
Sbjct: 212 LCAMQLFSHMHAVISTATCMRRSSIQSTFSINPEIVCDPLSDYNVWSMLKPINTTGTLKP 271
Query: 189 SITLVTA--RIDSASLFDGVSPGA 254
+V A R+DS S F V+PGA
Sbjct: 272 DDRVVVAATRLDSRSFFWNVAPGA 295
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 347 NILWTLFNGEAFDYIGSQRVAYDIKRGVWPPNAPLAPTDVKLHVEIGQI 493
N+++ F GE FDYIGS R+ YD+++G + P+ +V VE+GQ+
Sbjct: 324 NVMFVFFQGETFDYIGSSRMVYDMEKGKF----PVQLENVDSFVELGQV 368
>AL445230-8|CAI15011.1| 319|Homo sapiens nicastrin protein.
Length = 319
Score = 52.8 bits (121), Expect = 1e-06
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +3
Query: 30 QLNSFMFAAINTEVCMRRSATSTI--VTTTKVCDPLGDQNVYYSLFP-RTKESKKQSITL 200
QL S M A I+T CMRRS+ + + VCDPL D NV+ L P T + K +
Sbjct: 51 QLFSHMHAVISTATCMRRSSIQSTFSINPEIVCDPLSDYNVWSMLKPINTTGTLKPDDRV 110
Query: 201 VTA--RIDSASLFDGVSPGA 254
V A R+DS S F V+PGA
Sbjct: 111 VVAATRLDSRSFFWNVAPGA 130
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 347 NILWTLFNGEAFDYIGSQRVAYDIKRGVWPPNAPLAPTDVKLHVEIGQI 493
N+++ F GE FDYIGS R+ YD+++G + P+ +V VE+GQ+
Sbjct: 159 NVMFVFFQGETFDYIGSSRMVYDMEKGKF----PVQLENVDSFVELGQV 203
>AL445230-9|CAI15012.1| 219|Homo sapiens nicastrin protein.
Length = 219
Score = 45.2 bits (102), Expect = 2e-04
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 347 NILWTLFNGEAFDYIGSQRVAYDIKRGVWPPNAPLAPTDVKLHVEIGQI 493
N+++ F GE FDYIGS R+ YD+++G + P+ +V VE+GQ+
Sbjct: 68 NVMFVFFQGETFDYIGSSRMVYDMEKGKF----PVQLENVDSFVELGQV 112
>AL445230-5|CAI15008.1| 255|Homo sapiens nicastrin protein.
Length = 255
Score = 35.5 bits (78), Expect = 0.19
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 374 EAFDYIGSQRVAYDIKRGVWPPNAPLAPTDVKLHVEIGQI 493
E FDYIGS R+ YD+++G + P+ +V VE+GQ+
Sbjct: 195 ETFDYIGSSRMVYDMEKGKF----PVQLENVDSFVELGQV 230
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,111,160
Number of Sequences: 237096
Number of extensions: 2081958
Number of successful extensions: 3630
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3616
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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