Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11021
(707 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003245-1|AAO25002.1| 709|Drosophila melanogaster LD36812p pro... 78 1e-14
AE014297-3647|AAS65213.1| 665|Drosophila melanogaster CG7012-PB... 78 1e-14
AE014297-3646|AAF56349.2| 695|Drosophila melanogaster CG7012-PA... 78 1e-14
AF240470-1|AAG11414.1| 695|Drosophila melanogaster nicastrin pr... 72 7e-13
AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB... 30 3.5
AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA... 30 3.5
AY071245-1|AAL48867.1| 529|Drosophila melanogaster RE28781p pro... 29 4.7
AE014298-3149|AAF50807.1| 529|Drosophila melanogaster CG1644-PA... 29 4.7
AY095060-1|AAM11388.1| 587|Drosophila melanogaster LD47995p pro... 29 8.2
AE013599-2988|AAF57489.2| 587|Drosophila melanogaster CG10444-P... 29 8.2
>BT003245-1|AAO25002.1| 709|Drosophila melanogaster LD36812p
protein.
Length = 709
Score = 78.2 bits (184), Expect = 1e-14
Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = +3
Query: 12 RSLCSIQLNSFMFAAINTEVCMRRSATSTIVTTTKVCDPLGDQNVYYSLFPRTK--ESKK 185
RSLC++++ SFM AA+NTEVCMRR+ + +K CDPL +NVY +L+PR E+
Sbjct: 213 RSLCAVEVKSFMSAAVNTEVCMRRTNFINNLGGSKYCDPLEGRNVYATLYPRKPAIENNL 272
Query: 186 QSI------TLVTARIDSASLFDGVSPGAL 257
+++ LVT R+D+ ++FDGV GA+
Sbjct: 273 ETVHTNEKFILVTCRLDTTTMFDGVGLGAM 302
Score = 50.0 bits (114), Expect = 3e-06
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Frame = +2
Query: 308 QLIPVSKSNLYETNILWTLFNGEAFDYIGSQRVAYDIKRGVWPPNA----PLAPTDVKLH 475
QL+P +L+ N+L+ FNGE++DYIGSQR YD+++ +P + P+A ++
Sbjct: 320 QLLPPQSKDLH--NVLFVTFNGESYDYIGSQRFVYDMEKLQFPTESTGTPPIAFDNIDFM 377
Query: 476 VEIGQIGGSLSIM*TKIHGL 535
++IG + +I K+H L
Sbjct: 378 LDIGTLDDISNI---KLHAL 394
>AE014297-3647|AAS65213.1| 665|Drosophila melanogaster CG7012-PB,
isoform B protein.
Length = 665
Score = 78.2 bits (184), Expect = 1e-14
Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = +3
Query: 12 RSLCSIQLNSFMFAAINTEVCMRRSATSTIVTTTKVCDPLGDQNVYYSLFPRTK--ESKK 185
RSLC++++ SFM AA+NTEVCMRR+ + +K CDPL +NVY +L+PR E+
Sbjct: 169 RSLCAVEVKSFMSAAVNTEVCMRRTNFINNLGGSKYCDPLEGRNVYATLYPRKPAIENNL 228
Query: 186 QSI------TLVTARIDSASLFDGVSPGAL 257
+++ LVT R+D+ ++FDGV GA+
Sbjct: 229 ETVHTNEKFILVTCRLDTTTMFDGVGLGAM 258
Score = 50.0 bits (114), Expect = 3e-06
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Frame = +2
Query: 308 QLIPVSKSNLYETNILWTLFNGEAFDYIGSQRVAYDIKRGVWPPNA----PLAPTDVKLH 475
QL+P +L+ N+L+ FNGE++DYIGSQR YD+++ +P + P+A ++
Sbjct: 276 QLLPPQSKDLH--NVLFVTFNGESYDYIGSQRFVYDMEKLQFPTESTGTPPIAFDNIDFM 333
Query: 476 VEIGQIGGSLSIM*TKIHGL 535
++IG + +I K+H L
Sbjct: 334 LDIGTLDDISNI---KLHAL 350
>AE014297-3646|AAF56349.2| 695|Drosophila melanogaster CG7012-PA,
isoform A protein.
Length = 695
Score = 78.2 bits (184), Expect = 1e-14
Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = +3
Query: 12 RSLCSIQLNSFMFAAINTEVCMRRSATSTIVTTTKVCDPLGDQNVYYSLFPRTK--ESKK 185
RSLC++++ SFM AA+NTEVCMRR+ + +K CDPL +NVY +L+PR E+
Sbjct: 199 RSLCAVEVKSFMSAAVNTEVCMRRTNFINNLGGSKYCDPLEGRNVYATLYPRKPAIENNL 258
Query: 186 QSI------TLVTARIDSASLFDGVSPGAL 257
+++ LVT R+D+ ++FDGV GA+
Sbjct: 259 ETVHTNEKFILVTCRLDTTTMFDGVGLGAM 288
Score = 50.0 bits (114), Expect = 3e-06
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Frame = +2
Query: 308 QLIPVSKSNLYETNILWTLFNGEAFDYIGSQRVAYDIKRGVWPPNA----PLAPTDVKLH 475
QL+P +L+ N+L+ FNGE++DYIGSQR YD+++ +P + P+A ++
Sbjct: 306 QLLPPQSKDLH--NVLFVTFNGESYDYIGSQRFVYDMEKLQFPTESTGTPPIAFDNIDFM 363
Query: 476 VEIGQIGGSLSIM*TKIHGL 535
++IG + +I K+H L
Sbjct: 364 LDIGTLDDISNI---KLHAL 380
>AF240470-1|AAG11414.1| 695|Drosophila melanogaster nicastrin
protein.
Length = 695
Score = 72.1 bits (169), Expect = 7e-13
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 8/90 (8%)
Frame = +3
Query: 12 RSLCSIQLNSFMFAAINTEVCMRRSATSTIVTTTKVCDPLGDQNVYYSLFPRTKESK--- 182
RSLC++++ SFM AA+NTEVCMRR+ + +K CDPL +NV P +++S+
Sbjct: 199 RSLCAVEVKSFMSAAVNTEVCMRRTNFINNLGGSKYCDPLEGRNVSPPCTPESQQSETTL 258
Query: 183 -----KQSITLVTARIDSASLFDGVSPGAL 257
+ LVT R+D+ ++FDGV GA+
Sbjct: 259 ETVHTNEKFILVTCRLDTTTMFDGVGLGAM 288
Score = 50.0 bits (114), Expect = 3e-06
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Frame = +2
Query: 308 QLIPVSKSNLYETNILWTLFNGEAFDYIGSQRVAYDIKRGVWPPNA----PLAPTDVKLH 475
QL+P +L+ N+L+ FNGE++DYIGSQR YD+++ +P + P+A ++
Sbjct: 306 QLLPPQSKDLH--NVLFVTFNGESYDYIGSQRFVYDMEKLQFPTESTGTPPIAFDNIDFM 363
Query: 476 VEIGQIGGSLSIM*TKIHGL 535
++IG + +I K+H L
Sbjct: 364 LDIGTLDDISNI---KLHAL 380
>AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB,
isoform B protein.
Length = 4685
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 636 CHVICIRQLFQEDLYIIITVIYR*WREGRYKSVQR 532
CHV+ + L ++L+ I+ R W++G + S+ R
Sbjct: 2323 CHVLNPKALSNDELFGIVNPTTREWKDGLFSSIMR 2357
>AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA,
isoform A protein.
Length = 4543
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 636 CHVICIRQLFQEDLYIIITVIYR*WREGRYKSVQR 532
CHV+ + L ++L+ I+ R W++G + S+ R
Sbjct: 2181 CHVLNPKALSNDELFGIVNPTTREWKDGLFSSIMR 2215
>AY071245-1|AAL48867.1| 529|Drosophila melanogaster RE28781p
protein.
Length = 529
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 90 TSTIVTTTKVCDPLGDQNVYYSLFPRTKESKK 185
+S TT CD +G QN+++S + +E+ K
Sbjct: 122 SSRFETTDPTCDTMGSQNLFFSKYETWRETHK 153
>AE014298-3149|AAF50807.1| 529|Drosophila melanogaster CG1644-PA
protein.
Length = 529
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 90 TSTIVTTTKVCDPLGDQNVYYSLFPRTKESKK 185
+S TT CD +G QN+++S + +E+ K
Sbjct: 122 SSRFETTDPTCDTMGSQNLFFSKYETWRETHK 153
>AY095060-1|AAM11388.1| 587|Drosophila melanogaster LD47995p
protein.
Length = 587
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 640 VLSCYMHSTIVSGRFVYHYHRHLSLMARG*VQKRSKAM 527
+L STI SG +++Y+R + +G + KR + M
Sbjct: 282 ILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRDQIM 319
>AE013599-2988|AAF57489.2| 587|Drosophila melanogaster CG10444-PA
protein.
Length = 587
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 640 VLSCYMHSTIVSGRFVYHYHRHLSLMARG*VQKRSKAM 527
+L STI SG +++Y+R + +G + KR + M
Sbjct: 282 ILGMLSFSTIFSGLSIFYYYRDCDPLLKGRIDKRDQIM 319
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,002,536
Number of Sequences: 53049
Number of extensions: 672439
Number of successful extensions: 1712
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1708
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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