Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11020
         (809 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    32   0.005
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    28   0.076
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    26   0.41 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    26   0.41 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.8  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 32.3 bits (70), Expect = 0.005
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +2

Query: 353 WTLFNGEAFDYIGSQRVAYDIKRGVWPPNAPLAPTDVKLHVEIGQIGG 496
           W L + ++F  + SQRV    K G + P+    P DVK  VE  +I G
Sbjct: 274 WHLTDSQSFPLV-SQRVPQLAKNGAYGPDMIYTPEDVKALVEYARIRG 320


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 0.076
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 36  SFMFAAINTEVCMRRSATSTIVTTTKVCDPLGDQNVYYSLFPR--TKESKKQSITLVTAR 209
           +F F  +N+      S +      T V DP  D  +Y +L PR  + ++  +S+  VT  
Sbjct: 55  NFSFGQVNSPPSSTSSGSLGQFPATPVIDPAKDPAIYSNLLPRPGSNDNSWESLIEVTKT 114

Query: 210 IDSASL 227
            +++ L
Sbjct: 115 SETSKL 120


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +2

Query: 344 NILWTLFNGEAFDYIGSQRVAYDIKRGV--WPPNAP 445
           ++ W  +NGEA  Y  S  +AYD +  V  W    P
Sbjct: 109 DVFWNCWNGEASRYQCSPGLAYDREARVCMWADQVP 144


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +2

Query: 344 NILWTLFNGEAFDYIGSQRVAYDIKRGV--WPPNAP 445
           ++ W  +NGEA  Y  S  +AYD +  V  W    P
Sbjct: 109 DVFWNCWNGEASRYQCSPGLAYDREARVCMWADQVP 144


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 268 ADDRTAAPGDTPSNKEAESILAVT 197
           ++D T  PGD PS K+   ++ +T
Sbjct: 176 SEDGTTIPGDLPS-KDVPQMITIT 198


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +2

Query: 59  YRSLHEKVSYLNDSNNNESVRSAWRSKRLLFP 154
           + SLH   + +ND+N N+  +   + + +  P
Sbjct: 255 FLSLHPAETSMNDANRNDCAKPLTQIRNIRGP 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,894
Number of Sequences: 336
Number of extensions: 4312
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)