Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11020
         (809 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           26   1.6  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     26   1.6  
AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    24   6.4  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    23   8.4  

>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 18  CSIQLNSFMFAAINTEVCMRRSATSTIVTTTKVC 119
           C  +  +     + T VCMR  AT T   T K C
Sbjct: 174 CKDEAGNVTCPVLQTFVCMRCKATGTKAHTAKYC 207


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 18  CSIQLNSFMFAAINTEVCMRRSATSTIVTTTKVC 119
           C  +  +     + T VCMR  AT T   T K C
Sbjct: 175 CKDEAGNVTCPVLQTFVCMRCKATGTKAHTAKYC 208


>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 14  AMLNTVEFLHVCCNKYRSLHEKVSYLNDS 100
           A + TVE  HV    +R ++EKV   +DS
Sbjct: 4   AEIQTVEQKHVIPAMFRDVYEKVELGSDS 32


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 465 NYTLKSARSVDPYQICERKYMAFERF 542
           N TLK    +DP   C R Y AF  F
Sbjct: 114 NITLK-LELLDPLDNCARAYYAFRTF 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 865,535
Number of Sequences: 2352
Number of extensions: 18254
Number of successful extensions: 71
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)