Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11019
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.099
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 27.5 bits (58), Expect = 0.099
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = -1

Query: 463 FVLAFSAFFLWMYSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLKTLC-LCTH 287
           + L FS    ++     + F +++   F  SE +  +++     YFR +  KT C L T 
Sbjct: 353 YTLVFSVLKQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKYRETYFRLSKTKTFCTLVTA 412

Query: 286 SSFCGIRALAVL 251
             +C + A+ VL
Sbjct: 413 LVYCSL-AIFVL 423


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 147 ILDHLTDVLSGVGVCDLI 94
           IL H+    SG+ +CDLI
Sbjct: 252 ILWHIVGTFSGIFLCDLI 269


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 288 IVPSVAYAHWLSSSLTKATVTTLST 214
           + PSV Y H   SS T AT    +T
Sbjct: 239 MAPSVMYPHLNRSSPTTATAIASAT 263


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 288 IVPSVAYAHWLSSSLTKATVTTLST 214
           + PSV Y H   SS T AT    +T
Sbjct: 187 MAPSVMYPHLNRSSPTTATAIASAT 211


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 288 IVPSVAYAHWLSSSLTKATVTTLST 214
           + PSV Y H   SS T AT    +T
Sbjct: 370 MAPSVMYPHLNRSSPTTATAIASAT 394


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 512 VLLHFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVL 402
           VLLHF+   LSL  K     + +L  ++   E  +++
Sbjct: 180 VLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIV 216


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -3

Query: 143 LIILRMFCLELVFAISLISFGSNHTFFLPHRITEAASLFC 24
           L I   +C  ++F + L+     + FF    I     LFC
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFC 183


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 512 VLLHFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVL 402
           VLLHF+   LSL  K     + +L  ++   E  +++
Sbjct: 180 VLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIV 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,484
Number of Sequences: 336
Number of extensions: 3237
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)