Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11018
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    26   0.39 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    26   0.39 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.3  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 230 TLYFTV-FRKSILVYKSFIEFID*LMCDKVLNSINSRKKIYLL 105
           T +F + FRK +L     +  ID  +  K L  +  R K+YL+
Sbjct: 85  TYFFNILFRKKLLNAVKILSKIDETLNSKPLKPVKIRTKVYLV 127


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 230 TLYFTV-FRKSILVYKSFIEFID*LMCDKVLNSINSRKKIYLL 105
           T +F + FRK +L     +  ID  +  K L  +  R K+YL+
Sbjct: 81  TYFFNILFRKKLLNAVKILSKIDETLNSKPLKPVKIRTKVYLV 123


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 471 LFGTDCLVISVKIFLVCI 418
           +FG   L+I+  IF++C+
Sbjct: 603 MFGVSFLLITQTIFIICV 620


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 525 IVNFGNIYRTHIIFKTYCLY 584
           I+NFG      +IF + C+Y
Sbjct: 168 IINFGYTLAKFMIFTSTCIY 187


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 474 FQLKHIIKTVETCTV*VIVN 533
           F LKHI+  ++ C   +++N
Sbjct: 601 FLLKHIVPKLQLCMQNLVIN 620


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 558 IIFKTYCLYILVVLQCCT 611
           ++  TYCL++L V   C+
Sbjct: 286 LVDSTYCLFLLFVFCDCS 303


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 558 IIFKTYCLYILVVLQCCT 611
           ++  TYCL++L V   C+
Sbjct: 286 LVDSTYCLFLLFVFCDCS 303


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 558 IIFKTYCLYILVVLQCCT 611
           ++  TYCL++L V   C+
Sbjct: 286 LVDSTYCLFLLFVFCDCS 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,808
Number of Sequences: 336
Number of extensions: 4365
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)