Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11018
         (776 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.60 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.60 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   1.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   1.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -1

Query: 470 FLEQTA*LFLSKYFSSVSTFIIKITWSDK*NLQIFNDQTPT 348
           FLE+   +F+S      ST  + + W  K  ++I N  + T
Sbjct: 481 FLERLNLIFMSSSLQWSSTHTLDVAWRRKVTIEILNSLSAT 521


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -1

Query: 470 FLEQTA*LFLSKYFSSVSTFIIKITWSDK*NLQIFNDQTPT 348
           FLE+   +F+S      ST  + + W  K  ++I N  + T
Sbjct: 519 FLERLNLIFMSSSLQWSSTHTLDVAWRRKVTIEILNSLSAT 559


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 288 SKRYSMEYRKIETKIDYFFHFV 223
           S +Y  EY   E K+DYF   V
Sbjct: 207 SSKYMREYNDPEYKLDYFMEDV 228


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 286 ARQLNLKGCNILC 324
           AR+L L GC +LC
Sbjct: 307 ARELQLPGCEVLC 319


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 286 ARQLNLKGCNILC 324
           AR+L L GC +LC
Sbjct: 322 ARELQLPGCEVLC 334


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +1

Query: 541  TFIGRTSFLKHIAYTFWL 594
            T+   T   +H+ Y FW+
Sbjct: 1272 TYFEATDLQQHVEYQFWV 1289


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +1

Query: 541  TFIGRTSFLKHIAYTFWL 594
            T+   T   +H+ Y FW+
Sbjct: 1268 TYFEATDLQQHVEYQFWV 1285


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,307
Number of Sequences: 438
Number of extensions: 4595
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)