Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11017X
(550 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0970 + 21338072-21338074,21338192-21338240,21338688-213389... 100 9e-22
02_04_0177 + 20669053-20669055,20669150-20669198,20669680-206699... 100 9e-22
01_07_0270 - 42417782-42417850,42418207-42418342,42418826-424191... 97 1e-20
01_07_0054 - 40779336-40779599,40779734-40779848,40779998-407801... 34 0.065
06_03_0930 - 26038341-26038508,26039114-26039254,26040799-260408... 31 0.46
01_01_0972 + 7672048-7672390,7672546-7672709,7672864-7672961,767... 31 0.61
02_01_0105 - 775740-776624,777633-778268 30 1.4
07_03_1296 + 25583195-25584385 29 2.4
02_04_0475 + 23229046-23229480,23230062-23231205,23232187-232323... 29 2.4
01_05_0305 + 20659199-20660026,20660147-20660179 29 2.4
07_03_1452 - 26629219-26629428,26630113-26630280,26630363-266304... 29 3.2
05_04_0080 - 17742425-17742578,17742855-17743038,17743202-177432... 29 3.2
03_05_0528 - 25268396-25269217 29 3.2
02_05_0460 - 29224525-29224620,29225525-29226625 28 4.3
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 28 4.3
12_02_0020 - 12388777-12389062,12389637-12389818 28 5.6
04_04_0063 - 22441549-22442961 28 5.6
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 28 5.6
08_02_0802 + 21386248-21387468 27 7.5
06_01_1074 - 8765183-8765278,8765657-8765749,8766520-8766600,876... 27 7.5
01_05_0453 + 22375253-22375513,22376560-22376655,22376749-223768... 27 7.5
11_06_0409 - 23217558-23218355,23218808-23219297,23219515-232195... 27 9.9
04_04_1568 - 34475707-34476822,34476894-34477083,34477330-344774... 27 9.9
02_05_0146 - 26267245-26267339,26267427-26267469,26267589-262677... 27 9.9
>04_03_0970 +
21338072-21338074,21338192-21338240,21338688-21338970,
21339570-21339705,21339761-21339769
Length = 159
Score = 100 bits (239), Expect = 9e-22
Identities = 42/71 (59%), Positives = 59/71 (83%)
Frame = +2
Query: 41 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 220
M++PK+NR I +YLF+EGV+ AKKDY+ KH +++ +PNLQVIK MQS KS+ YV+E F
Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 221 AWRHFYWYLTN 253
+W+++YWYLTN
Sbjct: 60 SWQYYYWYLTN 70
Score = 49.2 bits (112), Expect = 2e-06
Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +1
Query: 256 GIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGPVG-RPDAPARSAEDRSAYRRTPAAP 426
GIE+LR +L+LP EIVPATLK+S R GP G RP P R DR +
Sbjct: 72 GIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDRPRFGDRDGYR 131
Query: 427 GVAPHDKKADVG--PGSADLEFKGGY 498
G P D G G A EF+ +
Sbjct: 132 G-GPRGAPGDFGGEKGGAPAEFQPSF 156
>02_04_0177 +
20669053-20669055,20669150-20669198,20669680-20669962,
20670526-20670661,20671014-20671094
Length = 183
Score = 100 bits (239), Expect = 9e-22
Identities = 42/71 (59%), Positives = 59/71 (83%)
Frame = +2
Query: 41 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 220
M++PK+NR I +YLF+EGV+ AKKDY+ KH +++ +PNLQVIK MQS KS+ YV+E F
Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 221 AWRHFYWYLTN 253
+W+++YWYLTN
Sbjct: 60 SWQYYYWYLTN 70
Score = 49.2 bits (112), Expect = 2e-06
Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +1
Query: 256 GIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGPVG-RPDAPARSAEDRSAYRRTPAAP 426
GIE+LR +L+LP EIVPATLK+S R GP G RP P R DR +
Sbjct: 72 GIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDRPRFGDRDGYR 131
Query: 427 GVAPHDKKADVG--PGSADLEFKGGY 498
G P D G G A EF+ +
Sbjct: 132 G-GPRGAPGDFGGEKGGAPAEFQPSF 156
>01_07_0270 -
42417782-42417850,42418207-42418342,42418826-42419108,
42419459-42419507,42419614-42419616
Length = 179
Score = 96.7 bits (230), Expect = 1e-20
Identities = 41/71 (57%), Positives = 57/71 (80%)
Frame = +2
Query: 41 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 220
M++ K+NR I +YLF EGV+ AKKDY+ KH +++ +PNL+VIK MQS KS+ YV+E F
Sbjct: 1 MIISKKNRREICKYLFHEGVLYAKKDYNLAKHPKVD-VPNLEVIKLMQSFKSKEYVRETF 59
Query: 221 AWRHFYWYLTN 253
+W+H+YWYLTN
Sbjct: 60 SWQHYYWYLTN 70
Score = 49.2 bits (112), Expect = 2e-06
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Frame = +1
Query: 256 GIEYLRIFLHLPPEIVPATLKRSVR--TETVRRGPVG-RPDAPARSAEDRSAYRRTP--- 417
GIE+LR +L+LP E+VP TLK+S + + GP G RP P R DR +
Sbjct: 72 GIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEGDRPRFGDRDGYR 131
Query: 418 AAPGVAPHDKKADVGPGSADLE--FKG---GYGRG 507
P AP D + G A+ + F+G G+GRG
Sbjct: 132 GGPRGAPGDFGGEKGGAPAEFQPSFRGSRPGFGRG 166
>01_07_0054 -
40779336-40779599,40779734-40779848,40779998-40780181,
40780322-40780393,40780485-40780611,40780830-40781011,
40781099-40781249
Length = 364
Score = 34.3 bits (75), Expect = 0.065
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 71 IYEYLFKEGVMVAKKDYHAP-KHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYL 247
+Y+ L ++G +VA K H+P H + ++ L I+ + GY +E Y Y+
Sbjct: 84 VYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYV 143
Query: 248 TNGVLNT 268
NG ++T
Sbjct: 144 PNGSVST 150
>06_03_0930 -
26038341-26038508,26039114-26039254,26040799-26040858,
26040972-26041034,26041444-26041454,26041722-26041802,
26042783-26043020,26043563-26043997
Length = 398
Score = 31.5 bits (68), Expect = 0.46
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 376 ARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRGS 510
AR RS+ RR+P+ G A + G ++ L++ GG G GS
Sbjct: 58 ARGKRSRSSRRRSPSGSGSAATKGRWARGSPASPLDYSGGSGSGS 102
>01_01_0972 +
7672048-7672390,7672546-7672709,7672864-7672961,
7673040-7673361,7674021-7675220
Length = 708
Score = 31.1 bits (67), Expect = 0.61
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +2
Query: 2 SFLC*VSLQAAFKMLMPKQNRVAIYEYLFKEGVMVAK--KDYHAPKHTELEKIPNLQVIK 175
+FL V+ + F L + + Y+ ++ G VA +H PK K+ +
Sbjct: 151 AFLFLVTFSSLFCTLPLRNTMIVDYKLIYPSGSAVAGIVNSFHTPKGATKAKLQ----VN 206
Query: 176 AMQSLKSRGYVKEQFAWRHFYWYLTNG 256
AM KS V FAW F W+ T G
Sbjct: 207 AM--FKS---VAGSFAWAFFQWFYTGG 228
>02_01_0105 - 775740-776624,777633-778268
Length = 506
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 223 LEALLLVPNQWGIEYLRIFLHLPPEIVPATLKR-SVRTETVRRGPVGRPDAPAR 381
L AL +P + + LR+FL+LP VPA L R + R +R G P P R
Sbjct: 252 LFALAYLPVGFAVALLRVFLNLP---VPARLVRHTYRLTGIRLAVRGAPPPPPR 302
>07_03_1296 + 25583195-25584385
Length = 396
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = +1
Query: 280 LHLPPEIVPATLKRSVR--TETVRRGPVGRPDAPARSAEDRSAYRRTPA---APGVAPHD 444
LHL P PA +KRS R + + P DA R ++ A+ + AP +AP
Sbjct: 76 LHLQPNPDPAEVKRSYRRLSNLLSSNPRPGADAALRCVQEAFAHLSDSSANPAPALAPPP 135
Query: 445 KKADVGPGSA 474
A G SA
Sbjct: 136 APASGGDASA 145
>02_04_0475 +
23229046-23229480,23230062-23231205,23232187-23232334,
23232776-23234225
Length = 1058
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 538 FSYCLNYEAGCHVHSLP*IQDQLSLD--QHQPFYHEVQHQGQQEYV 407
FSYC + GC ++S IQ +SL Q +P H + ++YV
Sbjct: 465 FSYCSTFPKGCEIYSDDLIQQWISLGFIQERPNKHISLEKIGEQYV 510
>01_05_0305 + 20659199-20660026,20660147-20660179
Length = 286
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +1
Query: 280 LHLPPEI-----VPATLKRSVRTETVRRGPVG--RPDAPARSAEDRSAYRRTPAAPGVA 435
L LPP + A S+ TV GP G +P P + +++RR P+A GV+
Sbjct: 122 LKLPPRLQAAAAAAAAADSSLSPNTVLHGPYGGNKPPRPLTRSGSTASHRRKPSAVGVS 180
>07_03_1452 -
26629219-26629428,26630113-26630280,26630363-26630425,
26630499-26630606,26630820-26630932,26631026-26631322,
26631424-26631502,26631733-26631841,26631927-26631968,
26632467-26632597,26633482-26633623,26633713-26633828,
26634121-26634657
Length = 704
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 107 AKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAW-RHFYWYLTNGVL 262
AKK H ++ IP + + +++RGY K+ + RHF + L GVL
Sbjct: 160 AKKGDHKGHDVAVKVIPKAKYLVERWLIQARGYWKKGATFSRHFVFVLAPGVL 212
>05_04_0080 -
17742425-17742578,17742855-17743038,17743202-17743273,
17743343-17743469,17743915-17744135,17744234-17744387
Length = 303
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 IYEYLFKEGVMVA-KKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYL 247
+Y+ L +G +VA KK AP+ E++ L I + GY +E Y YL
Sbjct: 98 VYKGLLLDGSVVAIKKRIGAPRQEFAEEVRKLSEINHRNIVTLIGYCQEGGLQMLVYEYL 157
Query: 248 TNG 256
NG
Sbjct: 158 PNG 160
>03_05_0528 - 25268396-25269217
Length = 273
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 463 PGSADLEFKGGYGRGSL 513
PGS +LE GGYG G +
Sbjct: 106 PGSTELEINGGYGEGGM 122
>02_05_0460 - 29224525-29224620,29225525-29226625
Length = 398
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 352 PVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA 474
PV APA AE S R P P PH A V SA
Sbjct: 270 PVSPASAPAALAESSSEELRPPPLPSSHPHAHAAAVVAASA 310
>01_06_0840 +
32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 166 SYQSYAITQVQRLCQRTVCLEALLLVPNQWGIEYLRIFLHLPPEIVPATLKRSV 327
S Y I +++R+ +CL+ LL PN ++LR L PP +P T++ ++
Sbjct: 752 SLLEYQIPEIKRMPIEELCLQVKLLDPNCRIADFLRKTLD-PP--IPETVRNAI 802
>12_02_0020 - 12388777-12389062,12389637-12389818
Length = 155
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 355 VGRPDAPARSAEDRSAYRRTPAAP 426
+GRP R E+RS +RTP+ P
Sbjct: 47 IGRPKGEGREWEERSRSQRTPSPP 70
>04_04_0063 - 22441549-22442961
Length = 470
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +1
Query: 352 PVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRGSLLHNLSN 531
P R + A+ + +++R T A P ++ +G + +FKGG+ + + + NL++
Sbjct: 339 PSVRLVSSAKGTPEAASHRWTAADKSRTPSSRRYSIGEPA---KFKGGFSQSARMGNLNH 395
Query: 532 K 534
K
Sbjct: 396 K 396
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 27.9 bits (59), Expect = 5.6
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 328 RTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAP--HDKKADVGPGSADLEFKGGYG 501
R + PV APA + +AY PAAP VAP D G G GG+G
Sbjct: 17 RRSDLAGAPVLAASAPAAANPYAAAYAPAPAAP-VAPAGGDFSRFGGRGRGGGAGGGGWG 75
Query: 502 RG 507
RG
Sbjct: 76 RG 77
>08_02_0802 + 21386248-21387468
Length = 406
Score = 27.5 bits (58), Expect = 7.5
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -3
Query: 467 PGPTSAFLS*GATPGAAGVRLYADLSSAE-RAGASGRPTGPRRTVSVRTERLSVAGTISG 291
P P+S F G V DLS A R + RP GPR + R E +++ G
Sbjct: 126 PEPSSGFFVAVVVDGEM-VLAAGDLSDAAYRRTRARRPAGPRPVLLSRREHVAMRDAGRG 184
Query: 290 GR 285
GR
Sbjct: 185 GR 186
>06_01_1074 -
8765183-8765278,8765657-8765749,8766520-8766600,
8767092-8767173,8767261-8767313,8767391-8767456,
8767534-8767697,8768028-8768295
Length = 300
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1
Query: 382 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRGS 510
SA RS R TP P + PH K+A P S L G G+
Sbjct: 3 SAAPRS--RLTPPTPAMHPHRKRARSPPASGSLVRCSSSGNGA 43
>01_05_0453 +
22375253-22375513,22376560-22376655,22376749-22376823,
22376907-22377019,22377530-22377620
Length = 211
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 400 AYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRGSLLHNLSNK 534
A++ AA V PH K D L+FK R +HN++++
Sbjct: 111 AFKLVAAAENVKPHLLKIDHDDNLLFLQFKAALEREQQVHNVNHE 155
>11_06_0409 -
23217558-23218355,23218808-23219297,23219515-23219591,
23219624-23219863,23220338-23220481,23220522-23220582,
23220875-23220934,23221097-23221192,23221306-23221398,
23221494-23221585
Length = 716
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +1
Query: 220 CLEALLLVPNQW---GIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVGRPDAPAR 381
C +L + P+Q G +R + H E + RSV + RRGP G P A R
Sbjct: 268 CTRSLQMSPSQCLVVGYGTVREYPHADLEKGKTVVSRSVISALRRRGPDGPPTASTR 324
>04_04_1568 -
34475707-34476822,34476894-34477083,34477330-34477464,
34477571-34477668,34477789-34477979,34478784-34479286,
34480169-34481568,34481655-34481855
Length = 1277
Score = 27.1 bits (57), Expect = 9.9
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 FLC*VSLQAAFKMLMPKQNRVAIYEYLFKEGVMVAK--KDYHAPKHTELEKIPNLQVIKA 178
FL VS F ++ ++ + Y+ ++ G A +H P+ +L K +QV
Sbjct: 748 FLFIVSFLGLFSVVPLRKIMIIDYKLIYPSGTATAHLINSFHTPQGAKLAK---MQV--- 801
Query: 179 MQSLKSRGYVKEQFAWRHFYWYLTNG 256
+ + +V F+W F W+ T G
Sbjct: 802 --KMLGKFFVMS-FSWGFFQWFYTGG 824
>02_05_0146 -
26267245-26267339,26267427-26267469,26267589-26267725,
26268172-26268299,26268419-26268495,26268593-26268679,
26268817-26268933,26269115-26269165,26269383-26269497,
26270033-26270292
Length = 369
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 435 CNTRGSRSTSVCRSVLSRAGWGIRTTNRATAYCL 334
C T ++ + + R WG R TNRAT + L
Sbjct: 327 CPTCLCTGMAMANNSIDRRAWGSRLTNRATLHIL 360
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,953,257
Number of Sequences: 37544
Number of extensions: 276969
Number of successful extensions: 981
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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