Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11012
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   8.0  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = -3

Query: 669 IMFTYNILLQIFCLYYIIK*IAFLLTRT 586
           +++T+N+    FC Y+++  +A + +RT
Sbjct: 315 VIYTFNLFYLCFCFYWLLVMVA-MFSRT 341


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = -3

Query: 669 IMFTYNILLQIFCLYYIIK*IAFLLTRT 586
           +++T+N+    FC Y+++  +A + +RT
Sbjct: 271 VIYTFNLFYLCFCFYWLLVMVA-MFSRT 297


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 669 IMFTYNILLQIFCLYYIIK*IAFLL 595
           I+FT ++L  + C+YY +  + FLL
Sbjct: 121 IIFTVHLLF-LLCIYYFVVPLFFLL 144


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 387 QTRRNPEWRMRTT 349
           QTRRNP +R RT+
Sbjct: 226 QTRRNPYYRPRTS 238


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 356 EQLLLEGGVPGIAD 315
           EQ+L EGG P + D
Sbjct: 837 EQILAEGGCPNLYD 850


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 304 PKTVPIPAPEPATPTVAHQHQ 242
           P+ VP P P+P   T +   Q
Sbjct: 393 PEPVPTPEPQPTQTTESEPTQ 413


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 299 DCSNTSSGTSYSHCRAPAPMNLAAESM 219
           DC+  SS       RAP  ++LAA  +
Sbjct: 30  DCTTASSWPGRPPKRAPVGLSLAASHL 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,064
Number of Sequences: 336
Number of extensions: 4349
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)