Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11008
(629 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 140 5e-34
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 140 7e-34
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 139 1e-33
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 137 5e-33
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 135 2e-32
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 134 6e-32
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 130 6e-31
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 129 2e-30
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 126 9e-30
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 123 1e-28
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 107 6e-24
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 107 6e-24
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 104 4e-23
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 104 4e-23
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 103 1e-22
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 97 8e-21
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 95 3e-20
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 76 2e-14
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 73 2e-13
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 70 1e-12
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 59 2e-09
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 56 1e-08
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 55 4e-08
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 33 0.12
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 33 0.21
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 33 0.21
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.48
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 29 2.5
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 29 2.5
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 29 2.5
At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B li... 28 4.4
At5g25140.1 68418.m02979 cytochrome P450 family protein CYTOCHRO... 28 5.9
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 27 7.8
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 7.8
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 7.8
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 27 7.8
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 7.8
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 140 bits (340), Expect = 5e-34
Identities = 63/84 (75%), Positives = 73/84 (86%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G+SIYG+KFEDENF KHTGPG+LSMANAGA+TNGSQFFI TVKT WLDG+HVVFG VVE
Sbjct: 82 GESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVE 141
Query: 181 GMEVVKQIETFGSQSGKTSKRIVI 252
G++VVK IE GS SGK +K +V+
Sbjct: 142 GLDVVKAIEKVGSSSGKPTKPVVV 165
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 140 bits (339), Expect = 7e-34
Identities = 64/84 (76%), Positives = 72/84 (85%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G+SIYG KFEDENF KHTGPG+LSMANAGA+TNGSQFFI TVKT WLDG+HVVFG VVE
Sbjct: 83 GESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVE 142
Query: 181 GMEVVKQIETFGSQSGKTSKRIVI 252
G++VVK IE GS SGK +K +VI
Sbjct: 143 GLDVVKAIEKIGSSSGKPTKPVVI 166
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 139 bits (337), Expect = 1e-33
Identities = 63/84 (75%), Positives = 73/84 (86%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G+SIYG+KF+DENF KHTGPG+LSMANAGA+TNGSQFFI T KTSWLDG+HVVFG VVE
Sbjct: 83 GESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVE 142
Query: 181 GMEVVKQIETFGSQSGKTSKRIVI 252
G+ VV+ IE GS SG+TSK +VI
Sbjct: 143 GLNVVRDIEKVGSDSGRTSKPVVI 166
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 137 bits (332), Expect = 5e-33
Identities = 63/84 (75%), Positives = 70/84 (83%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G+SIYG KF DENF LKHTGPGVLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG VV+
Sbjct: 110 GESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQ 169
Query: 181 GMEVVKQIETFGSQSGKTSKRIVI 252
GM+VV +IE G QSG ++VI
Sbjct: 170 GMDVVYKIEAEGKQSGTPKSKVVI 193
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 135 bits (327), Expect = 2e-32
Identities = 62/84 (73%), Positives = 69/84 (82%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G+SIYG KF DENF LKHTGPG LSMANAG DTNGSQFFITTV TSWLDGRHVVFG VV
Sbjct: 113 GESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVT 172
Query: 181 GMEVVKQIETFGSQSGKTSKRIVI 252
GM+VV ++E G+QSG ++VI
Sbjct: 173 GMDVVYKVEAEGNQSGTPKSKVVI 196
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 134 bits (323), Expect = 6e-32
Identities = 60/85 (70%), Positives = 71/85 (83%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G+SIYG+KFEDENF LKHTGPG+LSMAN+G +TNGSQFFI T KTSWLDG+HVVFG VV+
Sbjct: 82 GESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVD 141
Query: 181 GMEVVKQIETFGSQSGKTSKRIVIK 255
G VVK +E GS G S+R+VI+
Sbjct: 142 GYNVVKAMEDVGSDMGNPSERVVIE 166
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 130 bits (315), Expect = 6e-31
Identities = 60/84 (71%), Positives = 70/84 (83%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G+SIYG KF+DENF KHTG G+LSMAN+G +TNGSQFFI T KTSWLDG+HVVFG VV+
Sbjct: 82 GESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVK 141
Query: 181 GMEVVKQIETFGSQSGKTSKRIVI 252
G++VVK IE GS SGKTSK + I
Sbjct: 142 GLDVVKAIEKVGSDSGKTSKVVTI 165
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 129 bits (311), Expect = 2e-30
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G+SIYG+KF DENF LKHTGPG LSMAN+G D+NGSQFFITTV TSWLDG HVVFG V+
Sbjct: 137 GESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHHVVFGKVLS 196
Query: 181 GMEVVKQIETFGSQSGKTSKRIVI 252
GMEVV++IE G SG ++I
Sbjct: 197 GMEVVRKIEAQGQDSGVPKANVII 220
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 126 bits (305), Expect = 9e-30
Identities = 59/85 (69%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
GKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KTSWLDGRHVVFG V+E
Sbjct: 164 GKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIE 223
Query: 181 GMEVVKQIETFGSQSG-KTSKRIVI 252
GMEVVK IE + G + K++VI
Sbjct: 224 GMEVVKLIEEQETDRGDRPRKKVVI 248
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 123 bits (296), Expect = 1e-28
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G SIYG KFEDENFTLKHTGPG+LSMANAG +TNGSQFFI TVKTSWLD +HVVFG V+E
Sbjct: 166 GISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIE 225
Query: 181 GMEVVKQIET 210
GM++V+ +E+
Sbjct: 226 GMKLVRTLES 235
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 107 bits (257), Expect = 6e-24
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G+SIYG KF DENF L H G GVLSMAN G +TNGSQFFI + LDG+HVVFG VVE
Sbjct: 86 GESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVE 145
Query: 181 GMEVVKQIETFGSQSGKTSKRIVI 252
GM V+K++E G+ GK + + I
Sbjct: 146 GMAVIKKMELVGTSDGKPTSPVKI 169
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 107 bits (257), Expect = 6e-24
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G+SIYG KF DENF L H G GVLSMAN G +TNGSQFFI + LDG+HVVFG VVE
Sbjct: 86 GESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVE 145
Query: 181 GMEVVKQIETFGSQSGKTSKRIVI 252
GM V+K++E G+ GK + + I
Sbjct: 146 GMAVIKKMELVGTSDGKPTSPVKI 169
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 104 bits (250), Expect = 4e-23
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = +1
Query: 7 SIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV-EG 183
SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K WLD +HVVFG V+ +G
Sbjct: 110 SIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDG 169
Query: 184 MEVVKQIETFGSQSGKTSKRIVIKT 258
+ V+++IE K V+ T
Sbjct: 170 LLVMRKIENVAIGPNNRPKLAVVIT 194
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 104 bits (250), Expect = 4e-23
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G+SIYG KF+DENF LKH G+LSMAN+G +TNGSQFFITT +TS LDG+HVVFG V +
Sbjct: 83 GESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTK 142
Query: 181 GMEVVKQIE 207
GM VV+ IE
Sbjct: 143 GMGVVRSIE 151
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 103 bits (247), Expect = 1e-22
Identities = 48/83 (57%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 SIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 186
SIYG F DENF ++H+ G+++MAN G D+NGSQFFITTVK SWL+G HVV G V++GM
Sbjct: 127 SIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQGM 186
Query: 187 EVVKQIE-TFGSQSGKTSKRIVI 252
+ V IE G+ SGK K++VI
Sbjct: 187 DNVFAIEGGAGTYSGKPRKKVVI 209
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 97.1 bits (231), Expect = 8e-21
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 GKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 177
G+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT LDG+H +FG V
Sbjct: 72 GESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVC 131
Query: 178 EGMEVVKQI 204
GMEV+K++
Sbjct: 132 RGMEVIKRL 140
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 95.1 bits (226), Expect = 3e-20
Identities = 45/70 (64%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 GKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 177
G+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV T WLD +H VFG VV
Sbjct: 538 GQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVV 597
Query: 178 EGMEVVKQIE 207
+GM+VV+ IE
Sbjct: 598 KGMDVVQGIE 607
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 GKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 177
G SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K L+G + +FG V+
Sbjct: 63 GTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVI 122
Query: 178 EGMEVVKQIE 207
G EV+ +E
Sbjct: 123 HGFEVLDIME 132
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 72.5 bits (170), Expect = 2e-13
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +1
Query: 1 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVE 180
G+SIY KF DE+ L+H G+LSM+ A D GS F IT LD +VVFG +++
Sbjct: 86 GESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFGKLIQ 145
Query: 181 GMEVVKQIETFGSQSGKTSKRIVI 252
G E++K+IE G + GK + + I
Sbjct: 146 GKEILKKIERVGDEEGKPTVSVKI 169
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 69.7 bits (163), Expect = 1e-12
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 GKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 177
G+SI+G F+DE N L H+G GV+SMAN+G TNGSQFF+ + L+ +H VFG VV
Sbjct: 406 GESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVV 465
Query: 178 EGMEVVKQIE 207
G+ + +E
Sbjct: 466 GGLATLAAME 475
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +1
Query: 1 GKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFITTVKTSWLDGRHVVFGNV 174
G SIYG F DE + L+ + G+++MANA + ++NGSQFF T K WLD +H +FG V
Sbjct: 75 GDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKV 134
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 56.4 bits (130), Expect = 1e-08
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Frame = +1
Query: 4 KSIYGNK---FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFG 168
K +YG + ++DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG
Sbjct: 68 KFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFG 127
Query: 169 NVVEGMEVVKQI-ETFGSQSGKTSKRIVIK 255
+ EG + + +I E + + K I IK
Sbjct: 128 QIAEGFDTLTRINEAYVDPKNRPYKNIRIK 157
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 54.8 bits (126), Expect = 4e-08
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +1
Query: 10 IYGNKFEDENFTLKHT-GPGVLSMANAGADTNGSQFFITTVKTSW-LDGRHVVFGNVVEG 183
I+ + +DE F L H GPG++SMA D+NGSQF I +DG HVV G VVEG
Sbjct: 81 IHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEG 136
Query: 184 MEVVKQIE 207
+++++ IE
Sbjct: 137 LDLMRNIE 144
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 100 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTS 237
NG++F IT V + L+ +V G V+EGM VV+++ + TS
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTS 275
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 94 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 210
D +F ITT + LDG ++VFG V+EG++VV I +
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 43 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 207
+LKH ++ A + G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 152 SLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.48
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -1
Query: 206 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 27
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 109 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 207
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 109 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 207
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 109 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 207
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B
light-insensitive protein, putative similar to ULI3
(UV-B light insensitive) [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 656
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 409 LLLM*RTGYCIYFHALLVCSLLHFCYYI 492
++L R G +YF C L+HF YY+
Sbjct: 629 VILKFREGNIVYFFCSRSCFLMHFSYYL 656
>At5g25140.1 68418.m02979 cytochrome P450 family protein CYTOCHROME
P450 71B1 - Thlaspi arvense, EMBL:L24438
Length = 496
Score = 27.9 bits (59), Expect = 5.9
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 40 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 219
FT HT +L + AG DT+G IT V T + V+ E EV+K +
Sbjct: 282 FTRNHTKGILLDILLAGVDTSGHT--ITWVMTHLIKNPRVMKKAQAEVREVIKNKDNITE 339
Query: 220 Q--SGKTSKRIVIKTVVR 267
+ G ++V+K +R
Sbjct: 340 EDIEGLEYLKMVVKETLR 357
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 174 NIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLK 46
N+ D+ S+ + S D+E+G + S G G+D V K
Sbjct: 543 NVENDDSSSQSFASVSSRDQEVGDVRFSGGYGLGQDLSFGVCK 585
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 122 VMKNWEPLVSAPALAMERTPGPVCLR 45
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 122 VMKNWEPLVSAPALAMERTPGPVCLR 45
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 27.5 bits (58), Expect = 7.8
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 28 EDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVK 198
E+E KH+ L + A +G DTNG FF KT+ +VF N + EVV+
Sbjct: 536 EEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTAKKDIELVFVNPLS--EVVE 593
Query: 199 QIETFGSQ 222
+++ Q
Sbjct: 594 KLQRADEQ 601
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 122 VMKNWEPLVSAPALAMERTPGPVCLR 45
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,406,940
Number of Sequences: 28952
Number of extensions: 240004
Number of successful extensions: 527
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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