Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11007
         (429 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   0.93 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   2.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   2.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   2.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   5.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   5.0  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    20   8.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   8.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    20   8.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   8.7  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 299 CRGLLR*CHVREQTLWDIVVTPL 231
           C G L+ C  R   +W++V+  L
Sbjct: 349 CHGNLQSCPTRSHAVWEMVLNEL 371


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 187 ECLRRLIKCVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV 59
           +CL +L K  +    L L G     AI S IL+FV    +++V
Sbjct: 143 KCLYKLWKMPSLSEFLSLFGTETCPAIGSAILIFVVLPELDVV 185


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 187 ECLRRLIKCVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV 59
           +CL +L K  +    L L G     AI S IL+FV    +++V
Sbjct: 143 KCLYKLWKMPSLSEFLSLFGTETCPAIGSAILIFVVLPELDVV 185


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 10/27 (37%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -2

Query: 275 HVREQTLWDIVVTPLTLL--FLKFDRD 201
           HV++ T++ I+ T  TLL   ++FD++
Sbjct: 297 HVKKSTIFSILNTVSTLLIVMVQFDKE 323


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 299 CRGLLR*CHVREQTLWDIVVTPL 231
           C G    C  R   +W+IV+  L
Sbjct: 341 CNGNAHNCPSRSHPVWEIVMNEL 363


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 299 CRGLLR*CHVREQTLWDIVVTPL 231
           C G    C  R   +W+IV+  L
Sbjct: 348 CNGNAHNCPSRSHPVWEIVMNEL 370


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 239 TPLTLLFLKFDRDSSHLRVSETP 171
           +P  L + K DRD    R S TP
Sbjct: 82  SPGFLTYTKADRDVDLFRGSSTP 104


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 307 YVEDAGLQQY*WPATNTASYPGW 375
           YV+D+ ++   WP    A+   W
Sbjct: 527 YVDDSSVESRVWPRAAAAAERLW 549


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 105 LHIFFYLYQNQVLILYSI 52
           LH+FF+   N++L  Y +
Sbjct: 118 LHVFFFTLFNKLLGQYPV 135


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 203 DSSHLRVSETPH 168
           D+SH R+SE P+
Sbjct: 302 DTSHNRISEIPN 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,043
Number of Sequences: 336
Number of extensions: 1621
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)