Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11007
         (429 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   141   1e-35
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   3.5  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    23   4.6  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  141 bits (341), Expect = 1e-35
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = +3

Query: 45  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 224
           IEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEE 76

Query: 225 ERERRDNYVP 254
           ERERRDNYVP
Sbjct: 77  ERERRDNYVP 86



 Score = 56.0 bits (129), Expect = 5e-10
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +2

Query: 251 PKVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 361
           P VSALE DIIEVDP+TK+MLK LDFNNI  +QLT P
Sbjct: 86  PDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNP 121


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 275 DIIEVDPDTKDMLKMLDFNNINGL 346
           DI +VDPD    L  +  NNI G+
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGI 659


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 318 IFNISLVSGSTSMMSCSRADTLGH 247
           ++N+S     + M SCSR    GH
Sbjct: 304 VYNLSYPGYKSRMSSCSRCGGRGH 327


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,817
Number of Sequences: 2352
Number of extensions: 6871
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)