Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11007
(429 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22142-1|AAA28869.1| 131|Drosophila melanogaster protein ( D.me... 140 7e-34
BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p pro... 140 7e-34
AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal pr... 140 7e-34
AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB... 140 7e-34
AY119118-1|AAM50978.1| 911|Drosophila melanogaster RE16777p pro... 28 6.1
AE014298-579|AAF45908.2| 911|Drosophila melanogaster CG2941-PA ... 28 6.1
>M22142-1|AAA28869.1| 131|Drosophila melanogaster protein (
D.melanogaster ribosomalprotein S17 gene, complete cds.
).
Length = 131
Score = 140 bits (339), Expect = 7e-34
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +3
Query: 45 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 224
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 225 ERERRDNYVP 254
ERERRDNYVP
Sbjct: 77 ERERRDNYVP 86
Score = 66.5 bits (155), Expect = 1e-11
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +2
Query: 251 PKVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 367
P VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 86 PAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p
protein.
Length = 131
Score = 140 bits (339), Expect = 7e-34
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +3
Query: 45 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 224
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 225 ERERRDNYVP 254
ERERRDNYVP
Sbjct: 77 ERERRDNYVP 86
Score = 66.5 bits (155), Expect = 1e-11
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +2
Query: 251 PKVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 367
P VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 86 PAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal
protein S17 protein.
Length = 131
Score = 140 bits (339), Expect = 7e-34
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +3
Query: 45 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 224
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 225 ERERRDNYVP 254
ERERRDNYVP
Sbjct: 77 ERERRDNYVP 86
Score = 66.5 bits (155), Expect = 1e-11
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +2
Query: 251 PKVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 367
P VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 86 PAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB
protein.
Length = 131
Score = 140 bits (339), Expect = 7e-34
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +3
Query: 45 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 224
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 225 ERERRDNYVP 254
ERERRDNYVP
Sbjct: 77 ERERRDNYVP 86
Score = 66.5 bits (155), Expect = 1e-11
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +2
Query: 251 PKVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 367
P VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 86 PAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>AY119118-1|AAM50978.1| 911|Drosophila melanogaster RE16777p
protein.
Length = 911
Score = 27.9 bits (59), Expect = 6.1
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 158 HTFNEASQTLASARNLYQTSGRGA*EA*QLCPKVSAL--EHDIIEVDPDTKDMLKMLDFN 331
H +NE Q L +++ SG A ++C +V+ L EHD+I PDT D M N
Sbjct: 23 HDYNEKVQRL---KDMIYWSGNDEHIA-KICDQVTDLLVEHDLIIQPPDTMDPCAM---N 75
Query: 332 NINGL 346
++ GL
Sbjct: 76 HLRGL 80
>AE014298-579|AAF45908.2| 911|Drosophila melanogaster CG2941-PA
protein.
Length = 911
Score = 27.9 bits (59), Expect = 6.1
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 158 HTFNEASQTLASARNLYQTSGRGA*EA*QLCPKVSAL--EHDIIEVDPDTKDMLKMLDFN 331
H +NE Q L +++ SG A ++C +V+ L EHD+I PDT D M N
Sbjct: 23 HDYNEKVQRL---KDMIYWSGNDEHIA-KICDQVTDLLVEHDLIIQPPDTMDPCAM---N 75
Query: 332 NINGL 346
++ GL
Sbjct: 76 HLRGL 80
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,214,551
Number of Sequences: 53049
Number of extensions: 293968
Number of successful extensions: 872
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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