Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11006
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    30   0.017
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    26   0.36 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.83 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   1.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   5.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 142 YLLSAVCCIIIIYNFHTVDLLCVCKYISMYCM*VCILVYIILCK 11
           Y+    CC  II+  H + LLC+  +   YC  + +L     C+
Sbjct: 263 YMHLLFCCAFIIFTMHLLFLLCIYYF---YCALIILLCIYYFCR 303



 Score = 27.5 bits (58), Expect = 0.12
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = -1

Query: 121 CIIIIYNFHTVDLLC---VCKYISMYCM*VCILVYIILC 14
           C+ I +N H + LLC      ++  YC  +   V+ +LC
Sbjct: 61  CVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLC 99



 Score = 26.2 bits (55), Expect = 0.27
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -1

Query: 124 CCIIIIYNFHTVDLLCVCKYISMYCM*VCILVY 26
           CC  I +N H + LLC+  Y +++ + +  + Y
Sbjct: 183 CCAFIFFNMHLLFLLCL-DYFTLHLLFLPCIYY 214



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 460 ILFSYSVIYF*IRVLFLLHLHIFH 389
           +LF   + YF + + FLL ++ F+
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYYFY 150



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 460 ILFSYSVIYF*IRVLFLLHLHIF 392
           +LF  + I+F + +LFLL L  F
Sbjct: 180 LLFCCAFIFFNMHLLFLLCLDYF 202


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 81  YVCVSILVCIVCKYVYWYILYYVNQSL 1
           YV +  LV + C ++Y + +YY+  S+
Sbjct: 137 YVSLLQLVFVFCYFIYLFTVYYIYYSV 163


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 370 FYCVHIDEKYANVVKIKHEFKNKLLNMKI 456
           F+C+    K   V+   H+  NKL +M I
Sbjct: 95  FFCLFYQNKLIEVISKLHKLDNKLKHMLI 123


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 92  SMEIINDNDATNSTKQISSVPSP 160
           SM  +N ND      QI ++P P
Sbjct: 264 SMNDVNRNDCAKPLTQIRNIPGP 286


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 352 FHHHSYFYCVHIDEKYANVVKIKHEFKNKLLNMK 453
           F H  +F+ +  D     VV I H F+ + +N K
Sbjct: 71  FTHIFFFFAICCDFIALIVVNIVHVFRKRRVNYK 104


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 590 GERKRSKRTKSFLLFCLRASASRWLVISFLTIL 688
           G  +R+   K+FL  CL      +L+IS + IL
Sbjct: 160 GTMQRTSFFKTFLNSCLMDVYYEFLLISLINIL 192


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 92  SMEIINDNDATNSTKQISSVPSP 160
           SM   N ND      QI ++P P
Sbjct: 264 SMNDANRNDCAKPLTQIRNIPGP 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,029
Number of Sequences: 336
Number of extensions: 3559
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)