Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11006
         (733 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80776-1|AAC52012.1|  671|Homo sapiens unknown protein.                32   1.8  
U52077-1|AAC52010.1|  343|Homo sapiens mariner transposase protein.    32   1.8  
DQ341316-1|ABC72087.1|  344|Homo sapiens SETMAR protein.               32   1.8  
BC008931-1|AAH08931.2|  429|Homo sapiens SETMAR protein protein.       32   1.8  
AY952295-1|AAY29570.1|  671|Homo sapiens metnase protein.              32   1.8  
AK222734-1|BAD96454.1|  671|Homo sapiens SET domain and mariner ...    32   1.8  
AF054989-1|AAC09350.1|  671|Homo sapiens unknown protein.              32   1.8  
AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens ...    30   9.8  

>U80776-1|AAC52012.1|  671|Homo sapiens unknown protein.
          Length = 671

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 384 MDTIKIRVMMEFQLRRGRKTAQTAHNINN 298
           +D  +IR +  F+ + GRK A+T  NINN
Sbjct: 333 LDKKQIRAIFLFEFKMGRKAAETTRNINN 361


>U52077-1|AAC52010.1|  343|Homo sapiens mariner transposase protein.
          Length = 343

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 384 MDTIKIRVMMEFQLRRGRKTAQTAHNINN 298
           +D  +IR +  F+ + GRK A+T  NINN
Sbjct: 5   LDKKQIRAIFLFEFKMGRKAAETTRNINN 33


>DQ341316-1|ABC72087.1|  344|Homo sapiens SETMAR protein.
          Length = 344

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 384 MDTIKIRVMMEFQLRRGRKTAQTAHNINN 298
           +D  +IR +  F+ + GRK A+T  NINN
Sbjct: 6   LDKKQIRAIFLFEFKMGRKAAETTRNINN 34


>BC008931-1|AAH08931.2|  429|Homo sapiens SETMAR protein protein.
          Length = 429

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 384 MDTIKIRVMMEFQLRRGRKTAQTAHNINN 298
           +D  +IR +  F+ + GRK A+T  NINN
Sbjct: 91  LDKKQIRAIFLFEFKMGRKAAETTRNINN 119


>AY952295-1|AAY29570.1|  671|Homo sapiens metnase protein.
          Length = 671

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 384 MDTIKIRVMMEFQLRRGRKTAQTAHNINN 298
           +D  +IR +  F+ + GRK A+T  NINN
Sbjct: 333 LDKKQIRAIFLFEFKMGRKAAETTRNINN 361


>AK222734-1|BAD96454.1|  671|Homo sapiens SET domain and mariner
           transposase fusion gene variant protein.
          Length = 671

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 384 MDTIKIRVMMEFQLRRGRKTAQTAHNINN 298
           +D  +IR +  F+ + GRK A+T  NINN
Sbjct: 333 LDKKQIRAIFLFEFKMGRKAAETTRNINN 361


>AF054989-1|AAC09350.1|  671|Homo sapiens unknown protein.
          Length = 671

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 384 MDTIKIRVMMEFQLRRGRKTAQTAHNINN 298
           +D  +IR +  F+ + GRK A+T  NINN
Sbjct: 333 LDKKQIRAIFLFEFKMGRKAAETTRNINN 361


>AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12547 fis, clone NT2RM4000634. ).
          Length = 307

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 121 CIIIIYNFHTVDLLCVCKYISMYCM*VCILVYIILCKPV 5
           C+ +    H    +C+C ++ + C+  C+ V+I +C PV
Sbjct: 192 CVCLCVWVHICVCVCLCVWVHI-CVCACVWVHICVCVPV 229


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,834,239
Number of Sequences: 237096
Number of extensions: 1825638
Number of successful extensions: 3101
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3050
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)