Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11005
(719 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32944-1|AAB04149.1| 89|Homo sapiens cytoplasmic dynein light ... 167 3e-41
CR542128-1|CAG46925.1| 89|Homo sapiens DNCL1 protein. 167 3e-41
CR407672-1|CAG28600.1| 89|Homo sapiens DNCL1 protein. 167 3e-41
BC104245-1|AAI04246.1| 89|Homo sapiens dynein, light chain, LC... 167 3e-41
BC104244-1|AAI04245.1| 89|Homo sapiens dynein, light chain, LC... 167 3e-41
BC100289-1|AAI00290.1| 89|Homo sapiens dynein, light chain, LC... 167 3e-41
BC010744-1|AAH10744.1| 89|Homo sapiens dynein, light chain, LC... 166 8e-41
AF112997-1|AAP97230.1| 89|Homo sapiens protein inhibitor of ne... 166 8e-41
CR542177-1|CAG46974.1| 105|Homo sapiens DNAL4 protein. 66 1e-10
CR456487-1|CAG30373.1| 105|Homo sapiens DNAL4 protein. 66 1e-10
BT009847-1|AAP88849.1| 105|Homo sapiens dynein, axonemal, light... 66 1e-10
BC002968-1|AAH02968.1| 105|Homo sapiens dynein, axonemal, light... 66 1e-10
AY453399-1|AAS47516.1| 105|Homo sapiens proliferation-inducing ... 66 1e-10
AL035366-1|CAA23018.1| 105|Homo sapiens hypothetical protein pr... 66 1e-10
AL008583-1|CAA15429.1| 105|Homo sapiens dynein, axonemal, light... 66 1e-10
AK223349-1|BAD97069.1| 105|Homo sapiens dynein light chain 4, a... 65 3e-10
CR542195-1|CAG46992.1| 105|Homo sapiens DNAL4 protein. 64 5e-10
D87685-1|BAA13438.2| 2044|Homo sapiens KIAA0244 protein. 32 2.4
BC113652-1|AAI13653.1| 2039|Homo sapiens PHD finger protein 3 pr... 32 2.4
BC113650-1|AAI13651.1| 2039|Homo sapiens PHD finger protein 3 pr... 32 2.4
AL445676-1|CAI16104.1| 2039|Homo sapiens PHD finger protein 3 pr... 32 2.4
AL050329-1|CAM45842.1| 2039|Homo sapiens PHD finger protein 3 pr... 32 2.4
AF091622-1|AAF21292.1| 2039|Homo sapiens PHD finger protein 3 pr... 32 2.4
>U32944-1|AAB04149.1| 89|Homo sapiens cytoplasmic dynein light
chain 1 protein.
Length = 89
Score = 167 bits (407), Expect = 3e-41
Identities = 74/80 (92%), Positives = 78/80 (97%)
Frame = +3
Query: 18 MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
MCDRKAVIKNADMSEEMQQD+V+CATQALEK NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 198 NFGSYVTHETRHFIYFYLGR 257
NFGSYVTHET+HFIYFYLG+
Sbjct: 61 NFGSYVTHETKHFIYFYLGQ 80
>CR542128-1|CAG46925.1| 89|Homo sapiens DNCL1 protein.
Length = 89
Score = 167 bits (407), Expect = 3e-41
Identities = 74/80 (92%), Positives = 78/80 (97%)
Frame = +3
Query: 18 MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
MCDRKAVIKNADMSEEMQQD+V+CATQALEK NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 198 NFGSYVTHETRHFIYFYLGR 257
NFGSYVTHET+HFIYFYLG+
Sbjct: 61 NFGSYVTHETKHFIYFYLGQ 80
>CR407672-1|CAG28600.1| 89|Homo sapiens DNCL1 protein.
Length = 89
Score = 167 bits (407), Expect = 3e-41
Identities = 74/80 (92%), Positives = 78/80 (97%)
Frame = +3
Query: 18 MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
MCDRKAVIKNADMSEEMQQD+V+CATQALEK NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 198 NFGSYVTHETRHFIYFYLGR 257
NFGSYVTHET+HFIYFYLG+
Sbjct: 61 NFGSYVTHETKHFIYFYLGQ 80
>BC104245-1|AAI04246.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 167 bits (407), Expect = 3e-41
Identities = 74/80 (92%), Positives = 78/80 (97%)
Frame = +3
Query: 18 MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
MCDRKAVIKNADMSEEMQQD+V+CATQALEK NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 198 NFGSYVTHETRHFIYFYLGR 257
NFGSYVTHET+HFIYFYLG+
Sbjct: 61 NFGSYVTHETKHFIYFYLGQ 80
>BC104244-1|AAI04245.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 167 bits (407), Expect = 3e-41
Identities = 74/80 (92%), Positives = 78/80 (97%)
Frame = +3
Query: 18 MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
MCDRKAVIKNADMSEEMQQD+V+CATQALEK NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 198 NFGSYVTHETRHFIYFYLGR 257
NFGSYVTHET+HFIYFYLG+
Sbjct: 61 NFGSYVTHETKHFIYFYLGQ 80
>BC100289-1|AAI00290.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 167 bits (407), Expect = 3e-41
Identities = 74/80 (92%), Positives = 78/80 (97%)
Frame = +3
Query: 18 MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
MCDRKAVIKNADMSEEMQQD+V+CATQALEK NIEKDIAA IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 198 NFGSYVTHETRHFIYFYLGR 257
NFGSYVTHET+HFIYFYLG+
Sbjct: 61 NFGSYVTHETKHFIYFYLGQ 80
>BC010744-1|AAH10744.1| 89|Homo sapiens dynein, light chain,
LC8-type 2 protein.
Length = 89
Score = 166 bits (403), Expect = 8e-41
Identities = 73/80 (91%), Positives = 78/80 (97%)
Frame = +3
Query: 18 MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
M DRKAVIKNADMSE+MQQDAVDCATQA+EK NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 198 NFGSYVTHETRHFIYFYLGR 257
NFGSYVTHET+HFIYFYLG+
Sbjct: 61 NFGSYVTHETKHFIYFYLGQ 80
>AF112997-1|AAP97230.1| 89|Homo sapiens protein inhibitor of
neuronal nitric oxide synthase protein.
Length = 89
Score = 166 bits (403), Expect = 8e-41
Identities = 73/80 (91%), Positives = 78/80 (97%)
Frame = +3
Query: 18 MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
M DRKAVIKNADMSE+MQQDAVDCATQA+EK NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 198 NFGSYVTHETRHFIYFYLGR 257
NFGSYVTHET+HFIYFYLG+
Sbjct: 61 NFGSYVTHETKHFIYFYLGQ 80
>CR542177-1|CAG46974.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 VIKNADMSEEMQQDAVDCATQALEKXNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSY 212
+++++DM EEM+ + ++ A EK + + AA IK+ DKK+ +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 213 VTHETRHFIYFYLG 254
+THE ++ +Y Y G
Sbjct: 81 ITHEVKNLLYLYFG 94
>CR456487-1|CAG30373.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 VIKNADMSEEMQQDAVDCATQALEKXNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSY 212
+++++DM EEM+ + ++ A EK + + AA IK+ DKK+ +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 213 VTHETRHFIYFYLG 254
+THE ++ +Y Y G
Sbjct: 81 ITHEVKNLLYLYFG 94
>BT009847-1|AAP88849.1| 105|Homo sapiens dynein, axonemal, light
polypeptide 4 protein.
Length = 105
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 VIKNADMSEEMQQDAVDCATQALEKXNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSY 212
+++++DM EEM+ + ++ A EK + + AA IK+ DKK+ +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 213 VTHETRHFIYFYLG 254
+THE ++ +Y Y G
Sbjct: 81 ITHEVKNLLYLYFG 94
>BC002968-1|AAH02968.1| 105|Homo sapiens dynein, axonemal, light
chain 4 protein.
Length = 105
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 VIKNADMSEEMQQDAVDCATQALEKXNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSY 212
+++++DM EEM+ + ++ A EK + + AA IK+ DKK+ +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 213 VTHETRHFIYFYLG 254
+THE ++ +Y Y G
Sbjct: 81 ITHEVKNLLYLYFG 94
>AY453399-1|AAS47516.1| 105|Homo sapiens proliferation-inducing
protein 27 protein.
Length = 105
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 VIKNADMSEEMQQDAVDCATQALEKXNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSY 212
+++++DM EEM+ + ++ A EK + + AA IK+ DKK+ +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 213 VTHETRHFIYFYLG 254
+THE ++ +Y Y G
Sbjct: 81 ITHEVKNLLYLYFG 94
>AL035366-1|CAA23018.1| 105|Homo sapiens hypothetical protein
protein.
Length = 105
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 VIKNADMSEEMQQDAVDCATQALEKXNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSY 212
+++++DM EEM+ + ++ A EK + + AA IK+ DKK+ +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 213 VTHETRHFIYFYLG 254
+THE ++ +Y Y G
Sbjct: 81 ITHEVKNLLYLYFG 94
>AL008583-1|CAA15429.1| 105|Homo sapiens dynein, axonemal, light
chain 4 protein.
Length = 105
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 VIKNADMSEEMQQDAVDCATQALEKXNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSY 212
+++++DM EEM+ + ++ A EK + + AA IK+ DKK+ +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 213 VTHETRHFIYFYLG 254
+THE ++ +Y Y G
Sbjct: 81 ITHEVKNLLYLYFG 94
>AK223349-1|BAD97069.1| 105|Homo sapiens dynein light chain 4,
axonemal variant protein.
Length = 105
Score = 64.9 bits (151), Expect = 3e-10
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 VIKNADMSEEMQQDAVDCATQALEKXNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSY 212
+++++DM EEM+ ++ A EK + + AA IK+ DKK+ +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVGTMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 213 VTHETRHFIYFYLG 254
+THE ++ +Y Y G
Sbjct: 81 ITHEVKNLLYLYFG 94
>CR542195-1|CAG46992.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 64.1 bits (149), Expect = 5e-10
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 VIKNADMSEEMQQDAVDCATQALEKXNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSY 212
+++++DM EEM+ + ++ A EK + + AA I + DKK+ +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMINETMDKKFGSSWHVVIGEGFGFE 80
Query: 213 VTHETRHFIYFYLG 254
+THE ++ +Y Y G
Sbjct: 81 ITHEVKNLLYLYFG 94
>D87685-1|BAA13438.2| 2044|Homo sapiens KIAA0244 protein.
Length = 2044
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 489 VKTVHPLSHSLENRSHQH*PCLLLPH 412
V+ PL+HSL ++SH H CL PH
Sbjct: 591 VQIFKPLTHSLSDKSHAHPGCLKEPH 616
>BC113652-1|AAI13653.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 489 VKTVHPLSHSLENRSHQH*PCLLLPH 412
V+ PL+HSL ++SH H CL PH
Sbjct: 586 VQIFKPLTHSLSDKSHAHPGCLKEPH 611
>BC113650-1|AAI13651.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 489 VKTVHPLSHSLENRSHQH*PCLLLPH 412
V+ PL+HSL ++SH H CL PH
Sbjct: 586 VQIFKPLTHSLSDKSHAHPGCLKEPH 611
>AL445676-1|CAI16104.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 489 VKTVHPLSHSLENRSHQH*PCLLLPH 412
V+ PL+HSL ++SH H CL PH
Sbjct: 586 VQIFKPLTHSLSDKSHAHPGCLKEPH 611
>AL050329-1|CAM45842.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 489 VKTVHPLSHSLENRSHQH*PCLLLPH 412
V+ PL+HSL ++SH H CL PH
Sbjct: 586 VQIFKPLTHSLSDKSHAHPGCLKEPH 611
>AF091622-1|AAF21292.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 489 VKTVHPLSHSLENRSHQH*PCLLLPH 412
V+ PL+HSL ++SH H CL PH
Sbjct: 586 VQIFKPLTHSLSDKSHAHPGCLKEPH 611
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,950,625
Number of Sequences: 237096
Number of extensions: 2044906
Number of successful extensions: 7125
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 7003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7116
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -