Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11005
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48847-1|AAD00073.1|   89|Drosophila melanogaster 8kd dynein lig...   170   1e-42
AY069718-1|AAL39863.1|   89|Drosophila melanogaster LP02196p pro...   170   1e-42
AE014134-242|AAN10465.1|   89|Drosophila melanogaster CG5450-PB,...   170   1e-42
AE014134-241|AAF51383.1|   89|Drosophila melanogaster CG5450-PA,...   170   1e-42
U48848-1|AAD00074.1|   89|Drosophila melanogaster 8kd dynein lig...   169   3e-42
U48846-1|AAD00072.1|   89|Drosophila melanogaster 8kd dynein lig...   169   3e-42
U32855-1|AAB04148.1|   89|Drosophila melanogaster cytoplasmic dy...   169   3e-42
AE014298-666|AAN09128.1|   89|Drosophila melanogaster CG6998-PD,...   169   3e-42
AE014298-665|AAN09127.1|   89|Drosophila melanogaster CG6998-PC,...   169   3e-42
AE014298-664|AAN09126.1|   89|Drosophila melanogaster CG6998-PB,...   169   3e-42
AE014298-663|AAF45975.1|   89|Drosophila melanogaster CG6998-PA,...   169   3e-42
AE013599-1402|AAF58574.1|  104|Drosophila melanogaster CG8407-PA...    61   1e-09

>U48847-1|AAD00073.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  170 bits (414), Expect = 1e-42
 Identities = 77/80 (96%), Positives = 78/80 (97%)
 Frame = +3

Query: 18  MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
           M DRKAVIKNADMSEEMQQDAVDCATQALEK NIEKDIAAFIKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGR 60

Query: 198 NFGSYVTHETRHFIYFYLGR 257
           NFGSYVTHETRHFIYFYLG+
Sbjct: 61  NFGSYVTHETRHFIYFYLGQ 80


>AY069718-1|AAL39863.1|   89|Drosophila melanogaster LP02196p
           protein.
          Length = 89

 Score =  170 bits (414), Expect = 1e-42
 Identities = 77/80 (96%), Positives = 78/80 (97%)
 Frame = +3

Query: 18  MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
           M DRKAVIKNADMSEEMQQDAVDCATQALEK NIEKDIAAFIKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGR 60

Query: 198 NFGSYVTHETRHFIYFYLGR 257
           NFGSYVTHETRHFIYFYLG+
Sbjct: 61  NFGSYVTHETRHFIYFYLGQ 80


>AE014134-242|AAN10465.1|   89|Drosophila melanogaster CG5450-PB,
           isoform B protein.
          Length = 89

 Score =  170 bits (414), Expect = 1e-42
 Identities = 77/80 (96%), Positives = 78/80 (97%)
 Frame = +3

Query: 18  MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
           M DRKAVIKNADMSEEMQQDAVDCATQALEK NIEKDIAAFIKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGR 60

Query: 198 NFGSYVTHETRHFIYFYLGR 257
           NFGSYVTHETRHFIYFYLG+
Sbjct: 61  NFGSYVTHETRHFIYFYLGQ 80


>AE014134-241|AAF51383.1|   89|Drosophila melanogaster CG5450-PA,
           isoform A protein.
          Length = 89

 Score =  170 bits (414), Expect = 1e-42
 Identities = 77/80 (96%), Positives = 78/80 (97%)
 Frame = +3

Query: 18  MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
           M DRKAVIKNADMSEEMQQDAVDCATQALEK NIEKDIAAFIKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGR 60

Query: 198 NFGSYVTHETRHFIYFYLGR 257
           NFGSYVTHETRHFIYFYLG+
Sbjct: 61  NFGSYVTHETRHFIYFYLGQ 80


>U48848-1|AAD00074.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  169 bits (411), Expect = 3e-42
 Identities = 76/80 (95%), Positives = 78/80 (97%)
 Frame = +3

Query: 18  MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
           M DRKAVIKNADMSEEMQQDAVDCATQALEK NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 198 NFGSYVTHETRHFIYFYLGR 257
           NFGSYVTHETRHFIYFYLG+
Sbjct: 61  NFGSYVTHETRHFIYFYLGQ 80


>U48846-1|AAD00072.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  169 bits (411), Expect = 3e-42
 Identities = 76/80 (95%), Positives = 78/80 (97%)
 Frame = +3

Query: 18  MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
           M DRKAVIKNADMSEEMQQDAVDCATQALEK NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 198 NFGSYVTHETRHFIYFYLGR 257
           NFGSYVTHETRHFIYFYLG+
Sbjct: 61  NFGSYVTHETRHFIYFYLGQ 80


>U32855-1|AAB04148.1|   89|Drosophila melanogaster cytoplasmic
           dynein light chain 1 protein.
          Length = 89

 Score =  169 bits (411), Expect = 3e-42
 Identities = 76/80 (95%), Positives = 78/80 (97%)
 Frame = +3

Query: 18  MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
           M DRKAVIKNADMSEEMQQDAVDCATQALEK NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 198 NFGSYVTHETRHFIYFYLGR 257
           NFGSYVTHETRHFIYFYLG+
Sbjct: 61  NFGSYVTHETRHFIYFYLGQ 80


>AE014298-666|AAN09128.1|   89|Drosophila melanogaster CG6998-PD,
           isoform D protein.
          Length = 89

 Score =  169 bits (411), Expect = 3e-42
 Identities = 76/80 (95%), Positives = 78/80 (97%)
 Frame = +3

Query: 18  MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
           M DRKAVIKNADMSEEMQQDAVDCATQALEK NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 198 NFGSYVTHETRHFIYFYLGR 257
           NFGSYVTHETRHFIYFYLG+
Sbjct: 61  NFGSYVTHETRHFIYFYLGQ 80


>AE014298-665|AAN09127.1|   89|Drosophila melanogaster CG6998-PC,
           isoform C protein.
          Length = 89

 Score =  169 bits (411), Expect = 3e-42
 Identities = 76/80 (95%), Positives = 78/80 (97%)
 Frame = +3

Query: 18  MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
           M DRKAVIKNADMSEEMQQDAVDCATQALEK NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 198 NFGSYVTHETRHFIYFYLGR 257
           NFGSYVTHETRHFIYFYLG+
Sbjct: 61  NFGSYVTHETRHFIYFYLGQ 80


>AE014298-664|AAN09126.1|   89|Drosophila melanogaster CG6998-PB,
           isoform B protein.
          Length = 89

 Score =  169 bits (411), Expect = 3e-42
 Identities = 76/80 (95%), Positives = 78/80 (97%)
 Frame = +3

Query: 18  MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
           M DRKAVIKNADMSEEMQQDAVDCATQALEK NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 198 NFGSYVTHETRHFIYFYLGR 257
           NFGSYVTHETRHFIYFYLG+
Sbjct: 61  NFGSYVTHETRHFIYFYLGQ 80


>AE014298-663|AAF45975.1|   89|Drosophila melanogaster CG6998-PA,
           isoform A protein.
          Length = 89

 Score =  169 bits (411), Expect = 3e-42
 Identities = 76/80 (95%), Positives = 78/80 (97%)
 Frame = +3

Query: 18  MCDRKAVIKNADMSEEMQQDAVDCATQALEKXNIEKDIAAFIKKEFDKKYNPTWHCIVGR 197
           M DRKAVIKNADMSEEMQQDAVDCATQALEK NIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60

Query: 198 NFGSYVTHETRHFIYFYLGR 257
           NFGSYVTHETRHFIYFYLG+
Sbjct: 61  NFGSYVTHETRHFIYFYLGQ 80


>AE013599-1402|AAF58574.1|  104|Drosophila melanogaster CG8407-PA
           protein.
          Length = 104

 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +3

Query: 36  VIKNADMSEEMQQDAVDCATQALEKXNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSY 212
           ++K+ DM+EEM+ +A++ +  A EK +   + AA  IK+  DKK+   WH +VG  FG  
Sbjct: 20  LVKHTDMNEEMRIEAIELSITACEKYSSNYEHAAKIIKENMDKKFGIYWHVVVGEGFGFE 79

Query: 213 VTHETRHFIYFY 248
           V++ET + +Y +
Sbjct: 80  VSYETENILYLF 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,008,768
Number of Sequences: 53049
Number of extensions: 588071
Number of successful extensions: 1176
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)