Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11004X
         (527 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4VG49 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_Q08732 Cluster: Serine/threonine-protein kinase HRK1; n...    32   9.4  

>UniRef50_A4VG49 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas stutzeri A1501|Rep: Putative uncharacterized
           protein - Pseudomonas stutzeri (strain A1501)
          Length = 86

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = -3

Query: 363 EVNYSGSMLLAIPCLCTILSSYRR 292
           EV Y G++LL + C+C ++++YRR
Sbjct: 7   EVLYLGALLLLVDCICCLIAAYRR 30


>UniRef50_Q08732 Cluster: Serine/threonine-protein kinase HRK1; n=4;
           Saccharomycetales|Rep: Serine/threonine-protein kinase
           HRK1 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 759

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +2

Query: 299 YEDSIVHKHGIASN---ILPE*FTSVKTYDPLC 388
           +ED +   HGI  +   + PE  TS K+YDP C
Sbjct: 369 FEDGVTMAHGIVGSDPYLAPEVITSTKSYDPQC 401


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,070,939
Number of Sequences: 1657284
Number of extensions: 8616225
Number of successful extensions: 16505
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16502
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)