Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11004X
         (527 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069171-1|AAL39316.1|  544|Drosophila melanogaster GH21176p pro...    31   1.3  
AY058776-1|AAL14005.1|  544|Drosophila melanogaster SD05904p pro...    31   1.3  
AE013599-2547|AAM68486.1|  544|Drosophila melanogaster CG6406-PB...    31   1.3  
AE013599-2546|AAF57803.1|  544|Drosophila melanogaster CG6406-PA...    31   1.3  
BT025103-1|ABE73274.1|  396|Drosophila melanogaster IP10960p pro...    28   6.8  

>AY069171-1|AAL39316.1|  544|Drosophila melanogaster GH21176p
           protein.
          Length = 544

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -3

Query: 216 QSHCDAFSHWQLHT*IYNLQVLLQVKFNTQCIYYYINLNLKQTQKSSTLHSMRLS 52
           + +C+    W  H  I ++    +++  T  ++ Y N  + QTQKSS LH  R++
Sbjct: 151 EENCNREVKWGPHQRIESIHAQNRMRILTALLFCY-NQQVSQTQKSSLLHLCRVT 204


>AY058776-1|AAL14005.1|  544|Drosophila melanogaster SD05904p
           protein.
          Length = 544

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -3

Query: 216 QSHCDAFSHWQLHT*IYNLQVLLQVKFNTQCIYYYINLNLKQTQKSSTLHSMRLS 52
           + +C+    W  H  I ++    +++  T  ++ Y N  + QTQKSS LH  R++
Sbjct: 151 EENCNREVKWGPHQRIESIHAQNRMRILTALLFCY-NQQVSQTQKSSLLHLCRVT 204


>AE013599-2547|AAM68486.1|  544|Drosophila melanogaster CG6406-PB,
           isoform B protein.
          Length = 544

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -3

Query: 216 QSHCDAFSHWQLHT*IYNLQVLLQVKFNTQCIYYYINLNLKQTQKSSTLHSMRLS 52
           + +C+    W  H  I ++    +++  T  ++ Y N  + QTQKSS LH  R++
Sbjct: 151 EENCNREVKWGPHQRIESIHAQNRMRILTALLFCY-NQQVSQTQKSSLLHLCRVT 204


>AE013599-2546|AAF57803.1|  544|Drosophila melanogaster CG6406-PA,
           isoform A protein.
          Length = 544

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -3

Query: 216 QSHCDAFSHWQLHT*IYNLQVLLQVKFNTQCIYYYINLNLKQTQKSSTLHSMRLS 52
           + +C+    W  H  I ++    +++  T  ++ Y N  + QTQKSS LH  R++
Sbjct: 151 EENCNREVKWGPHQRIESIHAQNRMRILTALLFCY-NQQVSQTQKSSLLHLCRVT 204


>BT025103-1|ABE73274.1|  396|Drosophila melanogaster IP10960p
           protein.
          Length = 396

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
 Frame = +3

Query: 75  LSSFVSALSLGLYNNKYIVY*ILP---VKVPANCKFMYVTASD*MHRSETDQIRLIVEFC 245
           + +F+  ++ GLY N  +VY I     ++ P N     +  +D +  +    + ++ +F 
Sbjct: 35  ICTFLPLIAFGLYGNFSMVYVIATNRSLRSPTNLIIANMAVADLLTLAICPAMFMVNDFY 94

Query: 246 FTYGVFCRGRRYEPFIYGTKIVSYISMV*PVTY 344
             Y + C G R E F+    +++ +  +  V+Y
Sbjct: 95  QNYQLGCVGCRLEGFLVVVFLITAVLNLSVVSY 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,606,988
Number of Sequences: 53049
Number of extensions: 407679
Number of successful extensions: 655
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)