Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11002
(707 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 124 2e-28
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 124 2e-28
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 124 2e-28
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 38 0.010
AY070560-1|AAL48031.1| 712|Drosophila melanogaster LD33051p pro... 30 3.5
AF173549-1|AAL29184.1| 712|Drosophila melanogaster mystery 45A ... 30 3.5
AE013599-787|AAF58986.2| 712|Drosophila melanogaster CG8070-PA ... 30 3.5
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 124 bits (298), Expect = 2e-28
Identities = 52/84 (61%), Positives = 65/84 (77%)
Frame = +3
Query: 3 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 182
+GPL++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+SAF RL+ LF
Sbjct: 208 RGPLVVYDKDEGLRKAFRNIPGIETINVDKLNVLKLAPGGHVGRFVIWTESAFARLNDLF 267
Query: 183 GSWKTPSKQKKNFNLPQPKMANTD 254
G+WK PS KK +NLPQPKMANTD
Sbjct: 268 GTWKKPSTLKKGYNLPQPKMANTD 291
Score = 94.3 bits (224), Expect = 1e-19
Identities = 48/85 (56%), Positives = 62/85 (72%)
Frame = +2
Query: 254 LTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKN 433
L+RLLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A L +R
Sbjct: 292 LSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTV 351
Query: 434 LKALADAEKSGLKLSKRNPAMKAEK 508
K LA A+K ++L+K + A A K
Sbjct: 352 AKVLAKAKKQNVELAKSHFANVATK 376
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 124 bits (298), Expect = 2e-28
Identities = 52/84 (61%), Positives = 65/84 (77%)
Frame = +3
Query: 3 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 182
+GPL++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+SAF RL+ LF
Sbjct: 208 RGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLF 267
Query: 183 GSWKTPSKQKKNFNLPQPKMANTD 254
G+WK PS KK +NLPQPKMANTD
Sbjct: 268 GTWKKPSTLKKGYNLPQPKMANTD 291
Score = 95.5 bits (227), Expect = 6e-20
Identities = 50/91 (54%), Positives = 64/91 (70%)
Frame = +2
Query: 254 LTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKN 433
L+RLLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A L +R
Sbjct: 292 LSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTV 351
Query: 434 LKALADAEKSGLKLSKRNPAMKAEKYARGDA 526
K LA A+K ++L+K + A A K A A
Sbjct: 352 AKVLAKAKKQNVELAKSHFANVATKAAANRA 382
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 124 bits (298), Expect = 2e-28
Identities = 52/84 (61%), Positives = 65/84 (77%)
Frame = +3
Query: 3 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 182
+GPL++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+SAF RL+ LF
Sbjct: 208 RGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLF 267
Query: 183 GSWKTPSKQKKNFNLPQPKMANTD 254
G+WK PS KK +NLPQPKMANTD
Sbjct: 268 GTWKKPSTLKKGYNLPQPKMANTD 291
Score = 95.5 bits (227), Expect = 6e-20
Identities = 50/91 (54%), Positives = 64/91 (70%)
Frame = +2
Query: 254 LTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKN 433
L+RLLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A L +R
Sbjct: 292 LSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTV 351
Query: 434 LKALADAEKSGLKLSKRNPAMKAEKYARGDA 526
K LA A+K ++L+K + A A K A A
Sbjct: 352 AKVLAKAKKQNVELAKSHFANVATKAAANRA 382
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 38.3 bits (85), Expect = 0.010
Identities = 13/21 (61%), Positives = 20/21 (95%)
Frame = +3
Query: 3 KGPLIIFNKDQGLTRAFRNIP 65
+GPL++++KD+GL +AFRNIP
Sbjct: 208 RGPLVVYDKDEGLRKAFRNIP 228
>AY070560-1|AAL48031.1| 712|Drosophila melanogaster LD33051p
protein.
Length = 712
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 254 LTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKLNPYAAVLKRKAILELRRRK 430
LTR+ ++ +++ A K+ + + RK PL ++A +KLN + K++ + R +
Sbjct: 585 LTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKLNSIEMIYKKRKHDKESRLE 643
Query: 431 NLKA-LADAEKSGLKLSKRN 487
++A D E+ G K + N
Sbjct: 644 TVQAGRQDRERFGWKDGRVN 663
>AF173549-1|AAL29184.1| 712|Drosophila melanogaster mystery 45A
protein.
Length = 712
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 254 LTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKLNPYAAVLKRKAILELRRRK 430
LTR+ ++ +++ A K+ + + RK PL ++A +KLN + K++ + R +
Sbjct: 585 LTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKLNSIEMIYKKRKHDKESRLE 643
Query: 431 NLKA-LADAEKSGLKLSKRN 487
++A D E+ G K + N
Sbjct: 644 TVQAGRQDRERFGWKDGRVN 663
>AE013599-787|AAF58986.2| 712|Drosophila melanogaster CG8070-PA
protein.
Length = 712
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 254 LTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKLNPYAAVLKRKAILELRRRK 430
LTR+ ++ +++ A K+ + + RK PL ++A +KLN + K++ + R +
Sbjct: 585 LTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKLNSIEMIYKKRKHDKESRLE 643
Query: 431 NLKA-LADAEKSGLKLSKRN 487
++A D E+ G K + N
Sbjct: 644 TVQAGRQDRERFGWKDGRVN 663
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,604,578
Number of Sequences: 53049
Number of extensions: 562713
Number of successful extensions: 1828
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1819
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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