BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11000
(777 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 124 4e-28
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 124 4e-28
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 124 4e-28
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 124 4e-28
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 124 4e-28
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 124 4e-28
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 124 4e-28
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 124 4e-28
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 124 4e-28
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 124 4e-28
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 124 4e-28
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 124 4e-28
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 122 2e-27
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 118 3e-26
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p... 34 0.66
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance... 34 0.66
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein. 34 0.66
X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRN... 32 2.0
AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein. 32 2.0
BC042173-1|AAH42173.1| 722|Homo sapiens ankyrin repeat domain 6... 31 3.5
AL159174-2|CAI39610.1| 640|Homo sapiens ankyrin repeat domain 6... 31 3.5
AL159174-1|CAI39609.1| 692|Homo sapiens ankyrin repeat domain 6... 31 3.5
AL117504-1|CAB55968.1| 641|Homo sapiens hypothetical protein pr... 31 3.5
AL096678-3|CAI42281.1| 640|Homo sapiens ankyrin repeat domain 6... 31 3.5
AL096678-2|CAI42280.1| 692|Homo sapiens ankyrin repeat domain 6... 31 3.5
AB023174-1|BAA76801.2| 693|Homo sapiens KIAA0957 protein protein. 31 3.5
BC001078-1|AAH01078.2| 319|Homo sapiens ANKRD6 protein protein. 31 4.6
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 6.1
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 6.1
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 124 bits (299), Expect = 4e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 235 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTIL 341
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 4e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 235 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTIL 341
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 4e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 235 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTIL 341
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 4e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 235 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTIL 341
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 4e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 235 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTIL 341
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 4e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 235 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTIL 341
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 4e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 235 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTIL 341
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 4e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 235 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTIL 341
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 4e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 235 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTIL 341
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 4e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 235 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTIL 341
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 124 bits (299), Expect = 4e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 189 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 248
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 249 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 282
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 272 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 331
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 332 PLKNLRIMLKLNPYAKTMRRNTIL 355
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 141 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 187
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 107 GNMCRGGRMFAPTKTWRRWH 126
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 4e-28
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 235 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTIL 341
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 122 bits (293), Expect = 2e-27
Identities = 56/94 (59%), Positives = 66/94 (70%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IW +SAF L G R
Sbjct: 235 LNILKLAPGGHVGRFCIWIESAFRKLDELYGTWR 268
Score = 99.1 bits (236), Expect = 2e-20
Identities = 44/84 (52%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP +M NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTIL 341
Score = 60.1 bits (139), Expect = 9e-09
Identities = 26/47 (55%), Positives = 38/47 (80%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV +GH IE++PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMPKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 118 bits (283), Expect = 3e-26
Identities = 56/94 (59%), Positives = 66/94 (70%)
Frame = +1
Query: 256 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 435
KAW+DI KVY SQR+RAGKGKMRNRR IQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRR-IQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 233
Query: 436 XXXXXXAPGGHLGRFVIWTQSAFGSLTPYSGHGR 537
APGGH+GRF IWT+SAF L G R
Sbjct: 234 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 267
Score = 100 bits (240), Expect = 5e-21
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 683
R+LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 257 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 316
Query: 684 PLTNNKAMLKLNPYAAVLKRKAIL 755
PL N + MLKLNPYA ++R IL
Sbjct: 317 PLKNLRIMLKLNPYAKTMRRNTIL 340
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/47 (55%), Positives = 38/47 (80%)
Frame = +2
Query: 113 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 253
++AA+ +PALV ++GH IE+ PELPLVV DKV+ KTK+AV+ L++
Sbjct: 127 ALAASALPALVMSKGHRIEEFPELPLVVEDKVEGYKKTKEAVLLLKK 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 12 GNMCRGGRMFAPTKPWRRWH 71
GNMCRGGRMFAPTK WRRWH
Sbjct: 93 GNMCRGGRMFAPTKTWRRWH 112
>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
protein protein.
Length = 3703
Score = 33.9 bits (74), Expect = 0.66
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 10 SVTCVVVDVCSPPRSPGGVGTVASTSDSGERPWRQR 117
S T + D CSP SPG G+ + DSG+RP ++R
Sbjct: 2915 SETSSLADPCSP--SPGASGSAGKSGDSGDRPGQKR 2948
>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
binding protein protein.
Length = 2783
Score = 33.9 bits (74), Expect = 0.66
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 10 SVTCVVVDVCSPPRSPGGVGTVASTSDSGERPWRQR 117
S T + D CSP SPG G+ + DSG+RP ++R
Sbjct: 2001 SETSSLADPCSP--SPGASGSAGKSGDSGDRPGQKR 2034
>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
Length = 2553
Score = 33.9 bits (74), Expect = 0.66
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 10 SVTCVVVDVCSPPRSPGGVGTVASTSDSGERPWRQR 117
S T + D CSP SPG G+ + DSG+RP ++R
Sbjct: 1765 SETSSLADPCSP--SPGASGSAGKSGDSGDRPGQKR 1798
>X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRNA
from the Hox2 locus. ).
Length = 301
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 181 ASPGCSRQSPGDQQDQTGCHLPEA 252
A PGC +++ GD DQ+ C PEA
Sbjct: 271 APPGCPKEAAGDASDQSTCTSPEA 294
>AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein.
Length = 108
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 181 ASPGCSRQSPGDQQDQTGCHLPEA 252
A PGC +++ GD DQ+ C PEA
Sbjct: 78 APPGCPKEAAGDASDQSTCTSPEA 101
>BC042173-1|AAH42173.1| 722|Homo sapiens ankyrin repeat domain 6
protein.
Length = 722
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 76 ASTSDSGERPWRQRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPGDQQDQTGCHLPEAP 255
A+ SD P R + S +SG H + AS C + P +QTG H+ +
Sbjct: 598 AARSDQQAGPCVNRGTQTKKSGKSGPTRHRAQQPAASSTCGQPPPATGSEQTGPHIRDTS 657
Query: 256 KA 261
+A
Sbjct: 658 QA 659
>AL159174-2|CAI39610.1| 640|Homo sapiens ankyrin repeat domain 6
protein.
Length = 640
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 76 ASTSDSGERPWRQRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPGDQQDQTGCHLPEAP 255
A+ SD P R + S +SG H + AS C + P +QTG H+ +
Sbjct: 516 AARSDQQAGPCVNRGTQTKKSGKSGPTRHRAQQPAASSTCGQPPPATGSEQTGPHIRDTS 575
Query: 256 KA 261
+A
Sbjct: 576 QA 577
>AL159174-1|CAI39609.1| 692|Homo sapiens ankyrin repeat domain 6
protein.
Length = 692
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 76 ASTSDSGERPWRQRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPGDQQDQTGCHLPEAP 255
A+ SD P R + S +SG H + AS C + P +QTG H+ +
Sbjct: 568 AARSDQQAGPCVNRGTQTKKSGKSGPTRHRAQQPAASSTCGQPPPATGSEQTGPHIRDTS 627
Query: 256 KA 261
+A
Sbjct: 628 QA 629
>AL117504-1|CAB55968.1| 641|Homo sapiens hypothetical protein
protein.
Length = 641
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 76 ASTSDSGERPWRQRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPGDQQDQTGCHLPEAP 255
A+ SD P R + S +SG H + AS C + P +QTG H+ +
Sbjct: 517 AARSDQQAGPCVNRGTQTKKSGKSGPTRHRAQQPAASSTCGQPPPATGSEQTGPHIRDTS 576
Query: 256 KA 261
+A
Sbjct: 577 QA 578
>AL096678-3|CAI42281.1| 640|Homo sapiens ankyrin repeat domain 6
protein.
Length = 640
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 76 ASTSDSGERPWRQRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPGDQQDQTGCHLPEAP 255
A+ SD P R + S +SG H + AS C + P +QTG H+ +
Sbjct: 516 AARSDQQAGPCVNRGTQTKKSGKSGPTRHRAQQPAASSTCGQPPPATGSEQTGPHIRDTS 575
Query: 256 KA 261
+A
Sbjct: 576 QA 577
>AL096678-2|CAI42280.1| 692|Homo sapiens ankyrin repeat domain 6
protein.
Length = 692
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 76 ASTSDSGERPWRQRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPGDQQDQTGCHLPEAP 255
A+ SD P R + S +SG H + AS C + P +QTG H+ +
Sbjct: 568 AARSDQQAGPCVNRGTQTKKSGKSGPTRHRAQQPAASSTCGQPPPATGSEQTGPHIRDTS 627
Query: 256 KA 261
+A
Sbjct: 628 QA 629
>AB023174-1|BAA76801.2| 693|Homo sapiens KIAA0957 protein protein.
Length = 693
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 76 ASTSDSGERPWRQRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPGDQQDQTGCHLPEAP 255
A+ SD P R + S +SG H + AS C + P +QTG H+ +
Sbjct: 569 AARSDQQAGPCVNRGTQTKKSGKSGPTRHRAQQPAASSTCGQPPPATGSEQTGPHIRDTS 628
Query: 256 KA 261
+A
Sbjct: 629 QA 630
>BC001078-1|AAH01078.2| 319|Homo sapiens ANKRD6 protein protein.
Length = 319
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 76 ASTSDSGERPWRQRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPGDQQDQTGCHLPEAP 255
A+ SD P R + S +SG H + AS C + P +QTG H+ +
Sbjct: 195 AARSDQQAGPCVNRGTQTKKSGKSGPTRHRAQQLAASSTCGQPPPATGSEQTGPHIRDTS 254
Query: 256 KA 261
+A
Sbjct: 255 QA 256
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 647
++ DPL P ++K + L + ++AN + RL+KSD+++ +P
Sbjct: 23 KENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSP 70
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 504 RQLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 647
++ DPL P ++K + L + ++AN + RL+KSD+++ +P
Sbjct: 768 KENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSP 815
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,316,273
Number of Sequences: 237096
Number of extensions: 2592557
Number of successful extensions: 7590
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 6952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7589
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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