Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10999
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-15|CAC35848.2|  518|Caenorhabditis elegans Hypothetical...    64   1e-10
Z92825-3|CAB07311.1|  531|Caenorhabditis elegans Hypothetical pr...    57   1e-08
Z69788-8|CAA93644.3|  483|Caenorhabditis elegans Hypothetical pr...    52   3e-07
Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical p...    50   1e-06
AF040655-12|AAB95039.1|  507|Caenorhabditis elegans Hypothetical...    36   0.031

>AL132904-15|CAC35848.2|  518|Caenorhabditis elegans Hypothetical
           protein Y111B2A.19 protein.
          Length = 518

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 33/82 (40%), Positives = 52/82 (63%)
 Frame = +1

Query: 4   RRSTAEAFQILISHMFGDAGSPYLVGVISESLKSYLMPSPDDLPSKTVEFRALQYALFIT 183
           RR+TA A Q +++H+FGDA SPY++GV+S+ L+       DD  S    F ALQ AL++ 
Sbjct: 382 RRATALAVQTMVAHLFGDAASPYIIGVLSDMLRG------DD-ASAVGHFFALQKALYVP 434

Query: 184 CFVEVLGGIFFLITSAYIVRDK 249
            F+ V+ G F+L  + ++  D+
Sbjct: 435 TFMLVVAGAFYLAATFFVEDDR 456


>Z92825-3|CAB07311.1|  531|Caenorhabditis elegans Hypothetical
           protein C13C4.5 protein.
          Length = 531

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 30/87 (34%), Positives = 54/87 (62%)
 Frame = +1

Query: 4   RRSTAEAFQILISHMFGDAGSPYLVGVISESLKSYLMPSPDDLPSKTVEFRALQYALFIT 183
           RRS+A ++QILISHMFGDA  PY++G+IS++++        +  +    +++L  + ++ 
Sbjct: 418 RRSSASSWQILISHMFGDASGPYILGLISDAIRG-------NEDTAQAHYKSLVTSFWLC 470

Query: 184 CFVEVLGGIFFLITSAYIVRDKLKWTE 264
               VL  I F I++  +V+DK ++ E
Sbjct: 471 VGTLVLSVILFGISAITVVKDKARFNE 497


>Z69788-8|CAA93644.3|  483|Caenorhabditis elegans Hypothetical
           protein F09A5.1 protein.
          Length = 483

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 26/81 (32%), Positives = 47/81 (58%)
 Frame = +1

Query: 4   RRSTAEAFQILISHMFGDAGSPYLVGVISESLKSYLMPSPDDLPSKTVEFRALQYALFIT 183
           RRSTA ++  LISH+ GDA  PY++G IS+++KS  + SP+       ++++L YA  + 
Sbjct: 373 RRSTAFSYVTLISHLCGDASGPYIIGAISDAIKSNHLDSPE------WDYKSLAYASMLA 426

Query: 184 CFVEVLGGIFFLITSAYIVRD 246
             +  +  + + + +    RD
Sbjct: 427 PVMMGISTVLYFVAAIIFKRD 447


>Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical
           protein C39E9.10 protein.
          Length = 488

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 27/85 (31%), Positives = 51/85 (60%)
 Frame = +1

Query: 4   RRSTAEAFQILISHMFGDAGSPYLVGVISESLKSYLMPSPDDLPSKTVEFRALQYALFIT 183
           RRSTA ++ +L+SH+FGDA  PYL+G+IS++++ +    P D      ++ +L  A +  
Sbjct: 376 RRSTAFSYFVLVSHLFGDASGPYLIGLISDAIR-HGSTYPKD------QYHSLVSATYCC 428

Query: 184 CFVEVLGGIFFLITSAYIVRDKLKW 258
             + +L    + ++S  +V D+ K+
Sbjct: 429 VALLLLSAGLYFVSSLTLVSDRKKF 453


>AF040655-12|AAB95039.1|  507|Caenorhabditis elegans Hypothetical
           protein T24E12.1 protein.
          Length = 507

 Score = 35.9 bits (79), Expect = 0.031
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 67  PYLVGVISESLKSYLMPSPDDLPSKTVEFRALQYALF 177
           PYL G+I   + +Y +  P DLPS+  E +AL   L+
Sbjct: 324 PYLSGLIMPDMSNYSVNQPSDLPSQLTELQALNQELY 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,602,936
Number of Sequences: 27780
Number of extensions: 333074
Number of successful extensions: 845
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)