Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10999
         (756 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g62340.1 68418.m07825 invertase/pectin methylesterase inhibit...    30   1.9  
At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PP...    30   1.9  
At4g01480.1 68417.m00191 inorganic pyrophosphatase, putative [so...    29   2.5  
At3g53620.1 68416.m05923 inorganic pyrophosphatase, putative [so...    29   2.5  
At2g46860.1 68415.m05847 inorganic pyrophosphatase, putative [so...    29   2.5  
At1g01050.1 68414.m00005 inorganic pyrophosphatase, putative [so...    29   2.5  
At4g02900.1 68417.m00392 early-responsive to dehydration protein...    29   3.3  
At4g26150.1 68417.m03764 zinc finger (GATA type) family protein ...    29   4.4  
At1g35530.1 68414.m04411 DEAD/DEAH box helicase, putative low si...    28   5.8  

>At5g62340.1 68418.m07825 invertase/pectin methylesterase inhibitor
           family protein similar to SP|Q42534 Pectinesterase 2
           precursor (EC 3.1.1.11) (Pectin methylesterase 2) (PE 2)
           {Arabidopsis thaliana}; contains Pfam profile PF04043:
           Plant invertase/pectin methylesterase inhibitor
          Length = 206

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
 Frame = -2

Query: 308 SASKYLNYF*SSCNSSVHFSL---SLTMYADVIRKNIPPSTSTKHVMNSAY*SALNSTV 141
           + +K LN+  SSC S+ + SL   +L++YA+ I+      TS +H++++A   +LN  +
Sbjct: 32  TTTKALNFIQSSCKSTTYQSLCVETLSVYANTIK------TSPRHLLDAAITVSLNQAL 84


>At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PPA)
           / pyrophosphate phospho-hydrolase / PPase nearly
           identical to SP|P21216 Soluble inorganic pyrophosphatase
           (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase)
           {Arabidopsis thaliana}
          Length = 218

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -1

Query: 675 LNLNKILYTQHIYPNNYGSDPTTV 604
           + ++++LY+  +YP+NYG  P T+
Sbjct: 78  IKVDRVLYSSIVYPHNYGFIPRTI 101


>At4g01480.1 68417.m00191 inorganic pyrophosphatase, putative
           [soluble] / pyrophosphate phospho-hydrolase, putative /
           PPase, putative strong similarity to SP|Q43187 Soluble
           inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate
           phospho- hydrolase) (PPase) {Solanum tuberosum};
           contains Pfam profile PF00719: inorganic pyrophosphatase
          Length = 216

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -1

Query: 675 LNLNKILYTQHIYPNNYGSDPTTV 604
           + +++ILY+  +YP+NYG  P T+
Sbjct: 76  IKVDRILYSSVVYPHNYGFVPRTL 99


>At3g53620.1 68416.m05923 inorganic pyrophosphatase, putative
           [soluble] / pyrophosphate phospho-hydrolase, putative /
           PPase, putative similar to magnesium dependent soluble
           inorganic pyrophosphatase [Solanum tuberosum]
           GI:2706450; contains Pfam profile PF00719: inorganic
           pyrophosphatase
          Length = 216

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -1

Query: 675 LNLNKILYTQHIYPNNYGSDPTTV 604
           + +++ILY+  +YP+NYG  P T+
Sbjct: 76  IKVDRILYSSVVYPHNYGFIPRTL 99


>At2g46860.1 68415.m05847 inorganic pyrophosphatase, putative
           [soluble] / pyrophosphate phospho-hydrolase, putative /
           PPase, putative strong similarity to SP|Q43187 Soluble
           inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate
           phospho- hydrolase) (PPase) {Solanum tuberosum};
           contains Pfam profile PF00719: inorganic pyrophosphatase
          Length = 216

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -1

Query: 675 LNLNKILYTQHIYPNNYGSDPTTV 604
           + +++ILY+  +YP+NYG  P T+
Sbjct: 76  IKVDRILYSSVVYPHNYGFIPRTL 99


>At1g01050.1 68414.m00005 inorganic pyrophosphatase, putative
           [soluble] / pyrophosphate phospho-hydrolase, putative /
           PPase, putative strong similarity to SP|Q43187 Soluble
           inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate
           phospho- hydrolase) (PPase) {Solanum tuberosum};
           contains Pfam profile PF00719: inorganic pyrophosphatase
          Length = 212

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -1

Query: 675 LNLNKILYTQHIYPNNYGSDPTTV 604
           + +++ILY+  +YP+NYG  P T+
Sbjct: 72  IKVDRILYSSVVYPHNYGFVPRTL 95


>At4g02900.1 68417.m00392 early-responsive to dehydration
           protein-related / ERD protein-related similar to ERD4
           protein (early-responsive to dehydration stress)
           [Arabidopsis thaliana] GI:15375406; contains Pfam
           profile PF02714: Domain of unknown function DUF221
          Length = 785

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 22/67 (32%), Positives = 33/67 (49%)
 Frame = +1

Query: 4   RRSTAEAFQILISHMFGDAGSPYLVGVISESLKSYLMPSPDDLPSKTVEFRALQYALFIT 183
           RRS  + F  +I ++F   GS  + G   + LKS+L   P ++P KTV       A F  
Sbjct: 459 RRSAEKYFWFIIVNVF--LGS-IITGTAFQQLKSFLEQPPTEIP-KTVGVSIPMKATFFI 514

Query: 184 CFVEVLG 204
            ++ V G
Sbjct: 515 TYIMVDG 521


>At4g26150.1 68417.m03764 zinc finger (GATA type) family protein
           Arabidopsis thaliana mRNA for GATA transcription factor
           3, PID:e1254739
          Length = 352

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/25 (44%), Positives = 20/25 (80%)
 Frame = -3

Query: 541 RSTSNNTSIKANTLKHFPFKINTRQ 467
           +++SN +S+ + +L +FPF IN+RQ
Sbjct: 45  QASSNPSSLMSPSLSYFPFLINSRQ 69


>At1g35530.1 68414.m04411 DEAD/DEAH box helicase, putative low
           similarity to RNA helicase/RNAseIII CAF protein
           [Arabidopsis thaliana] GI:6102610; contains Pfam
           profiles PF00270: DEAD/DEAH box helicase, PF00271:
           Helicase conserved C-terminal domain
          Length = 1324

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/80 (22%), Positives = 38/80 (47%)
 Frame = +1

Query: 19  EAFQILISHMFGDAGSPYLVGVISESLKSYLMPSPDDLPSKTVEFRALQYALFITCFVEV 198
           E  Q++      D  +  LVG+  E+ K+++ P    +P +  +F   + ALF    V +
Sbjct: 78  ENHQVVSECGVNDNDNSPLVGIDPEAAKTWIYPG--FVPLRDYQFAITKTALFSNTLVAL 135

Query: 199 LGGIFFLITSAYIVRDKLKW 258
             G+   + +A ++ +  +W
Sbjct: 136 PTGLGKTLIAAVVMYNYFRW 155


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,286,880
Number of Sequences: 28952
Number of extensions: 293543
Number of successful extensions: 723
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1682736544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)