Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10997
(788 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor, arginine... 99 2e-20
L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor ... 99 2e-20
BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor, argini... 99 2e-20
BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor, argini... 99 2e-20
BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor, argini... 99 2e-20
AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing facto... 99 2e-20
L41887-1|AAA88098.1| 238|Homo sapiens splicing factor, arginine... 94 4e-19
L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein. 94 4e-19
BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor, argini... 94 4e-19
BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor, argini... 94 4e-19
BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor, argini... 94 4e-19
BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor, argini... 94 4e-19
BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor, argini... 94 4e-19
AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protei... 94 4e-19
AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich sp... 94 4e-19
AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein. 94 4e-19
AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens ... 91 4e-18
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 52 2e-06
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 52 2e-06
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 52 2e-06
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 52 2e-06
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 52 2e-06
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 52 2e-06
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 52 2e-06
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 46 2e-04
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 46 2e-04
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 46 2e-04
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 46 2e-04
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 46 2e-04
U30884-1|AAA93074.1| 107|Homo sapiens SRp40-2 protein. 44 6e-04
U30827-1|AAB60405.1| 107|Homo sapiens SRp40-3 protein. 44 6e-04
U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein. 44 6e-04
CR542182-1|CAG46979.1| 107|Homo sapiens SFRS5 protein. 44 6e-04
CR542167-1|CAG46964.1| 107|Homo sapiens SFRS5 protein. 44 6e-04
BX640605-1|CAE45711.1| 107|Homo sapiens hypothetical protein pr... 44 6e-04
BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor, argini... 44 6e-04
BC095420-1|AAH95420.1| 107|Homo sapiens SFRS5 protein protein. 44 6e-04
BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor, argini... 44 6e-04
BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor, argini... 44 6e-04
AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant pr... 44 6e-04
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 39 0.018
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 39 0.018
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 39 0.018
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 39 0.018
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 39 0.018
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 39 0.018
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 39 0.018
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 39 0.018
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 39 0.018
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 39 0.018
BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 38 0.031
BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 38 0.031
BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 38 0.031
AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 38 0.031
AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 38 0.031
AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 38 0.031
AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 38 0.031
AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 38 0.031
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 38 0.031
AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 38 0.031
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 38 0.031
AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 38 0.031
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 38 0.031
AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 38 0.031
AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 38 0.031
AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 38 0.031
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 38 0.031
AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 38 0.031
AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 38 0.031
AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 38 0.031
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 38 0.055
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 37 0.072
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 37 0.072
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 37 0.072
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 37 0.072
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 37 0.072
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 37 0.072
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 37 0.072
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 37 0.072
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 37 0.072
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 37 0.072
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 37 0.072
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 36 0.17
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 36 0.17
U30828-1|AAA93071.1| 135|Homo sapiens SRp55-2 protein. 36 0.17
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 36 0.17
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 36 0.17
BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repress... 36 0.17
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 36 0.17
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 36 0.17
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 36 0.17
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 36 0.17
AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. 36 0.17
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 36 0.17
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 36 0.17
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 36 0.17
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 36 0.17
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 35 0.38
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 35 0.38
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 35 0.38
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 35 0.38
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 35 0.38
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 35 0.38
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 35 0.38
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 35 0.38
AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein... 35 0.38
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 35 0.38
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 35 0.38
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 35 0.38
AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein... 35 0.38
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 35 0.38
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 35 0.38
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 35 0.38
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 35 0.38
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 35 0.38
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 34 0.51
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 34 0.51
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 33 0.89
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 33 0.89
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 33 0.89
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 33 0.89
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 33 0.89
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 33 0.89
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 33 1.2
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 33 1.2
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 33 1.2
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 33 1.2
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 33 1.2
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 33 1.2
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 33 1.2
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 33 1.2
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 33 1.2
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 33 1.2
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 33 1.2
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 33 1.6
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 33 1.6
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 33 1.6
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 33 1.6
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 33 1.6
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 33 1.6
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 33 1.6
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 33 1.6
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 33 1.6
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 33 1.6
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 33 1.6
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 32 2.1
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 32 2.1
BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein. 32 2.1
BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein MG... 32 2.1
BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein. 32 2.1
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 32 2.1
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 32 2.1
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 32 2.1
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 32 2.1
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 32 2.1
AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein. 32 2.1
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 32 2.7
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 32 2.7
AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein pr... 32 2.7
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 32 2.7
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 32 2.7
AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens ... 32 2.7
AF020307-1|AAC39543.1| 189|Homo sapiens HRS protein. 32 2.7
AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein. 32 2.7
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 31 3.6
X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1) ribonucleopro... 31 3.6
X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for ... 31 3.6
X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for ... 31 3.6
M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen... 31 3.6
M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen... 31 3.6
M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small ... 31 3.6
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 31 3.6
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 31 3.6
EF434183-1|ABO32292.1| 260|Homo sapiens TDP43 splice variant 2 ... 31 3.6
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 31 3.6
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 31 3.6
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 31 3.6
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 31 3.6
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 31 3.6
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 31 3.6
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 31 3.6
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 31 3.6
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 31 3.6
BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein. 31 3.6
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 31 3.6
BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear ribonucle... 31 3.6
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 31 3.6
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 31 3.6
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 31 3.6
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 31 3.6
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 31 3.6
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 31 3.6
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 31 3.6
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 31 3.6
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 31 3.6
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 31 3.6
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 31 3.6
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 31 3.6
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 31 3.6
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 31 3.6
AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein. 31 3.6
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 31 3.6
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 31 4.7
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 31 4.7
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 31 4.7
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 31 4.7
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 31 4.7
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 31 4.7
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 31 4.7
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 31 4.7
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 31 6.3
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 31 6.3
U79569-1|AAD00321.1| 269|Homo sapiens no arches protein. 31 6.3
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 31 6.3
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 31 6.3
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 31 6.3
EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and polyadenyl... 31 6.3
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 31 6.3
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 31 6.3
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 31 6.3
CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein. 31 6.3
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 31 6.3
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 31 6.3
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 31 6.3
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 31 6.3
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 31 6.3
BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein. 31 6.3
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 31 6.3
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 31 6.3
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 31 6.3
BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and polyadenyl... 31 6.3
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 31 6.3
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 31 6.3
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 31 6.3
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 31 6.3
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 31 6.3
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 31 6.3
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 31 6.3
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 30 8.3
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 30 8.3
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 30 8.3
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 30 8.3
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 30 8.3
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 30 8.3
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 30 8.3
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 30 8.3
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 30 8.3
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 30 8.3
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 30 8.3
>Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 99.1 bits (236), Expect = 2e-20
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
DCKVYVG+LGNN +K ELE AF YYGPLR+VWVARNPPGFAFVEFEDPR
Sbjct: 9 DCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 57
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSN 329
DA DAVR LDGRT+CG R RVE+SN
Sbjct: 58 DAADAVRELDGRTLCGCRVRVELSN 82
>L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor
protein.
Length = 164
Score = 99.1 bits (236), Expect = 2e-20
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
DCKVYVG+LGNN +K ELE AF YYGPLR+VWVARNPPGFAFVEFEDPR
Sbjct: 9 DCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 57
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSN 329
DA DAVR LDGRT+CG R RVE+SN
Sbjct: 58 DAADAVRELDGRTLCGCRVRVELSN 82
>BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 99.1 bits (236), Expect = 2e-20
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
DCKVYVG+LGNN +K ELE AF YYGPLR+VWVARNPPGFAFVEFEDPR
Sbjct: 9 DCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 57
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSN 329
DA DAVR LDGRT+CG R RVE+SN
Sbjct: 58 DAADAVRELDGRTLCGCRVRVELSN 82
>BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 99.1 bits (236), Expect = 2e-20
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
DCKVYVG+LGNN +K ELE AF YYGPLR+VWVARNPPGFAFVEFEDPR
Sbjct: 9 DCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 57
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSN 329
DA DAVR LDGRT+CG R RVE+SN
Sbjct: 58 DAADAVRELDGRTLCGCRVRVELSN 82
>BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 99.1 bits (236), Expect = 2e-20
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
DCKVYVG+LGNN +K ELE AF YYGPLR+VWVARNPPGFAFVEFEDPR
Sbjct: 9 DCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 57
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSN 329
DA DAVR LDGRT+CG R RVE+SN
Sbjct: 58 DAADAVRELDGRTLCGCRVRVELSN 82
>AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing factor
protein.
Length = 164
Score = 99.1 bits (236), Expect = 2e-20
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
DCKVYVG+LGNN +K ELE AF YYGPLR+VWVARNPPGFAFVEFEDPR
Sbjct: 9 DCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 57
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSN 329
DA DAVR LDGRT+CG R RVE+SN
Sbjct: 58 DAADAVRELDGRTLCGCRVRVELSN 82
>L41887-1|AAA88098.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7 protein.
Length = 238
Score = 94.3 bits (224), Expect = 4e-19
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 MSRYG----DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
MSRYG + KVYVG+LG A K ELE AFSYYGPLR VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DAEDAVRGLDG+ ICG R RVE+S CY+CG++GHYA
Sbjct: 59 DAEDAVRGLDGKVICGSRVRVELST--GMPRRSRFDRPPARRPFDPNDRCYECGEKGHYA 116
Query: 435 RDC 443
DC
Sbjct: 117 YDC 119
>L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein.
Length = 238
Score = 94.3 bits (224), Expect = 4e-19
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 MSRYG----DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
MSRYG + KVYVG+LG A K ELE AFSYYGPLR VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DAEDAVRGLDG+ ICG R RVE+S CY+CG++GHYA
Sbjct: 59 DAEDAVRGLDGKVICGSRVRVELST--GMPRRSRFDRPPARRPFDPNDRCYECGEKGHYA 116
Query: 435 RDC 443
DC
Sbjct: 117 YDC 119
>BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 94.3 bits (224), Expect = 4e-19
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 MSRYG----DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
MSRYG + KVYVG+LG A K ELE AFSYYGPLR VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DAEDAVRGLDG+ ICG R RVE+S CY+CG++GHYA
Sbjct: 59 DAEDAVRGLDGKVICGSRVRVELST--GMPRRSRFDRPPARRPFDPNDRCYECGEKGHYA 116
Query: 435 RDC 443
DC
Sbjct: 117 YDC 119
>BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 94.3 bits (224), Expect = 4e-19
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 MSRYG----DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
MSRYG + KVYVG+LG A K ELE AFSYYGPLR VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DAEDAVRGLDG+ ICG R RVE+S CY+CG++GHYA
Sbjct: 59 DAEDAVRGLDGKVICGSRVRVELST--GMPRRSRFDRPPARRPFDPNDRCYECGEKGHYA 116
Query: 435 RDC 443
DC
Sbjct: 117 YDC 119
>BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 94.3 bits (224), Expect = 4e-19
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 MSRYG----DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
MSRYG + KVYVG+LG A K ELE AFSYYGPLR VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DAEDAVRGLDG+ ICG R RVE+S CY+CG++GHYA
Sbjct: 59 DAEDAVRGLDGKVICGSRVRVELST--GMPRRSRFDRPPARRPFDPNDRCYECGEKGHYA 116
Query: 435 RDC 443
DC
Sbjct: 117 YDC 119
>BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 94.3 bits (224), Expect = 4e-19
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 MSRYG----DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
MSRYG + KVYVG+LG A K ELE AFSYYGPLR VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DAEDAVRGLDG+ ICG R RVE+S CY+CG++GHYA
Sbjct: 59 DAEDAVRGLDGKVICGSRVRVELST--GMPRRSRFDRPPARRPFDPNDRCYECGEKGHYA 116
Query: 435 RDC 443
DC
Sbjct: 117 YDC 119
>BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 94.3 bits (224), Expect = 4e-19
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 MSRYG----DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
MSRYG + KVYVG+LG A K ELE AFSYYGPLR VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DAEDAVRGLDG+ ICG R RVE+S CY+CG++GHYA
Sbjct: 59 DAEDAVRGLDGKVICGSRVRVELST--GMPRRSRFDRPPARRPFDPNDRCYECGEKGHYA 116
Query: 435 RDC 443
DC
Sbjct: 117 YDC 119
>AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protein 3
protein.
Length = 238
Score = 94.3 bits (224), Expect = 4e-19
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 MSRYG----DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
MSRYG + KVYVG+LG A K ELE AFSYYGPLR VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DAEDAVRGLDG+ ICG R RVE+S CY+CG++GHYA
Sbjct: 59 DAEDAVRGLDGKVICGSRVRVELST--GMPRRSRFDRPPARRPFDPNDRCYECGEKGHYA 116
Query: 435 RDC 443
DC
Sbjct: 117 YDC 119
>AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich
splicing factor 7 type B protein.
Length = 238
Score = 94.3 bits (224), Expect = 4e-19
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 MSRYG----DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
MSRYG + KVYVG+LG A K ELE AFSYYGPLR VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DAEDAVRGLDG+ ICG R RVE+S CY+CG++GHYA
Sbjct: 59 DAEDAVRGLDGKVICGSRVRVELST--GMPRRSRFDRPPARRPFDPNDRCYECGEKGHYA 116
Query: 435 RDC 443
DC
Sbjct: 117 YDC 119
>AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein.
Length = 238
Score = 94.3 bits (224), Expect = 4e-19
Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 MSRYG----DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
MSRYG + KVYVG+LG A K ELE AFSYYGPLR VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DAEDAVRGLDG+ ICG R RVE+S CY+CG++GHYA
Sbjct: 59 DAEDAVRGLDGKVICGSRVRVELST--GMPRRSRFDRPPARRPFDPNDRCYECGEKGHYA 116
Query: 435 RDC 443
DC
Sbjct: 117 YDC 119
>AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens
cDNA FLJ34106 fis, clone FCBBF3008073, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 7. ).
Length = 137
Score = 91.1 bits (216), Expect = 4e-18
Identities = 43/58 (74%), Positives = 46/58 (79%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 MSRYG----DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
MSRYG + KVYVG+LG A K ELE AFSYYGPLR VW+ARNPP FAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPRFAFVEFEDPR 58
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DAEDAVRGLDG+ ICG R RVE+S CY+CG++GHYA
Sbjct: 59 DAEDAVRGLDGKVICGSRVRVELST--GMPRRSRFDRPPARRPFDPNDRCYECGEKGHYA 116
Query: 435 RDC 443
DC
Sbjct: 117 YDC 119
>M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 248
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV--ARNPPGFAFVEFEDPR 255
DC++YVG+L + ++ED F YG +R++ + R P FAFVEFEDPR
Sbjct: 15 DCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 65
>M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 292
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV--ARNPPGFAFVEFEDPR 255
DC++YVG+L + ++ED F YG +R++ + R P FAFVEFEDPR
Sbjct: 15 DCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 65
>M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein.
Length = 248
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV--ARNPPGFAFVEFEDPR 255
DC++YVG+L + ++ED F YG +R++ + R P FAFVEFEDPR
Sbjct: 15 DCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 65
>BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein.
Length = 201
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV--ARNPPGFAFVEFEDPR 255
DC++YVG+L + ++ED F YG +R++ + R P FAFVEFEDPR
Sbjct: 15 DCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 65
>BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 248
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV--ARNPPGFAFVEFEDPR 255
DC++YVG+L + ++ED F YG +R++ + R P FAFVEFEDPR
Sbjct: 15 DCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 65
>AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 233
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV--ARNPPGFAFVEFEDPR 255
DC++YVG+L + ++ED F YG +R++ + R P FAFVEFEDPR
Sbjct: 47 DCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 97
>AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein.
Length = 248
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV--ARNPPGFAFVEFEDPR 255
DC++YVG+L + ++ED F YG +R++ + R P FAFVEFEDPR
Sbjct: 15 DCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 65
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 46.0 bits (104), Expect = 2e-04
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = +1
Query: 106 GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG---FAFVEFEDPR 255
GD ++YVG+L + + +LED F YG +R + + +N G FAFV FEDPR
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDPR 63
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 46.0 bits (104), Expect = 2e-04
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = +1
Query: 106 GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG---FAFVEFEDPR 255
GD ++YVG+L + + +LED F YG +R + + +N G FAFV FEDPR
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDPR 63
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 46.0 bits (104), Expect = 2e-04
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = +1
Query: 106 GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG---FAFVEFEDPR 255
GD ++YVG+L + + +LED F YG +R + + +N G FAFV FEDPR
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDPR 63
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 46.0 bits (104), Expect = 2e-04
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = +1
Query: 106 GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG---FAFVEFEDPR 255
GD ++YVG+L + + +LED F YG +R + + +N G FAFV FEDPR
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDPR 63
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 46.0 bits (104), Expect = 2e-04
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = +1
Query: 106 GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG---FAFVEFEDPR 255
GD ++YVG+L + + +LED F YG +R + + +N G FAFV FEDPR
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDPR 63
>U30884-1|AAA93074.1| 107|Homo sapiens SRp40-2 protein.
Length = 107
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
C+V++G L A + ++E F YG +R++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
>U30827-1|AAB60405.1| 107|Homo sapiens SRp40-3 protein.
Length = 107
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
C+V++G L A + ++E F YG +R++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
>U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein.
Length = 272
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
C+V++G L A + ++E F YG +R++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
>CR542182-1|CAG46979.1| 107|Homo sapiens SFRS5 protein.
Length = 107
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
C+V++G L A + ++E F YG +R++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
>CR542167-1|CAG46964.1| 107|Homo sapiens SFRS5 protein.
Length = 107
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
C+V++G L A + ++E F YG +R++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
>BX640605-1|CAE45711.1| 107|Homo sapiens hypothetical protein
protein.
Length = 107
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
C+V++G L A + ++E F YG +R++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
>BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
C+V++G L A + ++E F YG +R++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
>BC095420-1|AAH95420.1| 107|Homo sapiens SFRS5 protein protein.
Length = 107
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
C+V++G L A + ++E F YG +R++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
>BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
C+V++G L A + ++E F YG +R++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
>BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
C+V++G L A + ++E F YG +R++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
>AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant
protein.
Length = 326
Score = 44.0 bits (99), Expect = 6e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
C+V++G L A + ++E F YG +R++ + R GF FVEFEDPR
Sbjct: 7 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 51
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 39.1 bits (87), Expect = 0.018
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNV---W--VARNPPGFAFVEFEDP 252
C+VYVG + + + AF+ +GP++++ W V GFAFVE+E P
Sbjct: 111 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP 162
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFE 246
++YV + + S +++ F +G +++ +AR+P G+ F+E+E
Sbjct: 209 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 257
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 39.1 bits (87), Expect = 0.018
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNV---W--VARNPPGFAFVEFEDP 252
C+VYVG + + + AF+ +GP++++ W V GFAFVE+E P
Sbjct: 129 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP 180
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFE 246
++YV + + S +++ F +G +++ +AR+P G+ F+E+E
Sbjct: 227 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 275
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 39.1 bits (87), Expect = 0.018
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNV---W--VARNPPGFAFVEFEDP 252
C+VYVG + + + AF+ +GP++++ W V GFAFVE+E P
Sbjct: 86 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP 137
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFE 246
++YV + + S +++ F +G +++ +AR+P G+ F+E+E
Sbjct: 184 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 232
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 39.1 bits (87), Expect = 0.018
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNV---W--VARNPPGFAFVEFEDP 252
C+VYVG + + + AF+ +GP++++ W V GFAFVE+E P
Sbjct: 86 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP 137
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFE 246
++YV + + S +++ F +G +++ +AR+P G+ F+E+E
Sbjct: 184 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 232
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 39.1 bits (87), Expect = 0.018
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNV---W--VARNPPGFAFVEFEDP 252
C+VYVG + + + AF+ +GP++++ W V GFAFVE+E P
Sbjct: 69 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP 120
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFE 246
++YV + + S +++ F +G +++ +AR+P G+ F+E+E
Sbjct: 167 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 215
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 39.1 bits (87), Expect = 0.018
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNV---W--VARNPPGFAFVEFEDP 252
C+VYVG + + + AF+ +GP++++ W V GFAFVE+E P
Sbjct: 112 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP 163
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFE 246
++YV + + S +++ F +G +++ +AR+P G+ F+E+E
Sbjct: 210 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 258
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 39.1 bits (87), Expect = 0.018
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFED 249
S+ S++ K+++G L S L D FS +G +R V R+P GF FV F D
Sbjct: 12 SANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD 71
Query: 250 P 252
P
Sbjct: 72 P 72
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 39.1 bits (87), Expect = 0.018
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNV---W--VARNPPGFAFVEFEDP 252
C+VYVG + + + AF+ +GP++++ W V GFAFVE+E P
Sbjct: 112 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP 163
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFE 246
++YV + + S +++ F +G +++ +AR+P G+ F+E+E
Sbjct: 210 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 258
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 39.1 bits (87), Expect = 0.018
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNV---W--VARNPPGFAFVEFEDP 252
C+VYVG + + + AF+ +GP++++ W V GFAFVE+E P
Sbjct: 126 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP 177
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFE 246
++YV + + S +++ F +G +++ +AR+P G+ F+E+E
Sbjct: 224 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 272
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 39.1 bits (87), Expect = 0.018
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNV---W--VARNPPGFAFVEFEDP 252
C+VYVG + + + AF+ +GP++++ W V GFAFVE+E P
Sbjct: 129 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP 180
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFE 246
++YV + + S +++ F +G +++ +AR+P G+ F+E+E
Sbjct: 227 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 275
>BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein.
Length = 173
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2
protein.
Length = 183
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38
protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR protein
2 protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR protein
1 protein.
Length = 183
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 261
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 173
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 172
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 182
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein
(serine-arginine rich) 1 isoform 2 variant protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
Homo sapiens TLS-associated protein TASR-2 mRNA. ).
Length = 183
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 261
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein
TASR-1 protein.
Length = 183
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein
TASR protein.
Length = 183
Score = 38.3 bits (85), Expect = 0.031
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +1
Query: 94 MSRY---GDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFED 249
MSRY + ++V ++ ++ +L F YGP+ +V+V R P GFA+V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 250 PR 255
R
Sbjct: 61 VR 62
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 37.5 bits (83), Expect = 0.055
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
K+++G L S L D FS +G +R V R+P GF FV F DP
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP 68
>U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein.
Length = 157
Score = 37.1 bits (82), Expect = 0.072
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPR----MLKT 267
K++VG L N + LED FS +GP+ V V ++ GF F+ F +P ++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 268 QYVVWMDGRFAVVEPV*KCLMGVAVMAAGVH 360
+DGR V+ K G G H
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRGGGFGAH 97
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 37.1 bits (82), Expect = 0.072
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKT 267
KV+VG + ++ EL + FS YG + +V++ + FAFV F D ++ ++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQS 242
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 37.1 bits (82), Expect = 0.072
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKT 267
KV+VG + ++ EL + FS YG + +V++ + FAFV F D ++ ++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQS 242
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 37.1 bits (82), Expect = 0.072
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKT 267
KV+VG + ++ EL + FS YG + +V++ + FAFV F D ++ ++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQS 242
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 37.1 bits (82), Expect = 0.072
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKT 267
KV+VG + ++ EL + FS YG + +V++ + FAFV F D ++ ++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQS 242
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 37.1 bits (82), Expect = 0.072
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKT 267
KV+VG + ++ EL + FS YG + +V++ + FAFV F D ++ ++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQS 242
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 37.1 bits (82), Expect = 0.072
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKT 267
KV+VG + ++ EL + FS YG + +V++ + FAFV F D ++ ++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQS 242
>BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1,
RRM) protein 3 protein.
Length = 157
Score = 37.1 bits (82), Expect = 0.072
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPR----MLKT 267
K++VG L N + LED FS +GP+ V V ++ GF F+ F +P ++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 268 QYVVWMDGRFAVVEPV*KCLMGVAVMAAGVH 360
+DGR V+ K G G H
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRGGGFGAH 97
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 37.1 bits (82), Expect = 0.072
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKT 267
KV+VG + ++ EL + FS YG + +V++ + FAFV F D ++ ++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQS 242
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 37.1 bits (82), Expect = 0.072
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKT 267
KV+VG + ++ EL + FS YG + +V++ + FAFV F D ++ ++
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQS 242
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 37.1 bits (82), Expect = 0.072
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKT 267
KV+VG + ++ EL + FS YG + +V++ + FAFV F D ++ ++
Sbjct: 192 KVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQS 242
>U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein.
Length = 344
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L N + +++ FS YG L V + G+ FVEFED R
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSR 46
>U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein.
Length = 335
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L N + +++ FS YG L V + G+ FVEFED R
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSR 46
>U30828-1|AAA93071.1| 135|Homo sapiens SRp55-2 protein.
Length = 135
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L N + +++ FS YG L V + G+ FVEFED R
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSR 46
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.17
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLR--NVWVARNPP----GFAFVEFEDP 252
KV++G L N +K + + FS YG ++ ++ V R P G+A+VEFE+P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.17
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLR--NVWVARNPP----GFAFVEFEDP 252
KV++G L N +K + + FS YG ++ ++ V R P G+A+VEFE+P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repressor
protein (35 kDa) protein.
Length = 261
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 6/44 (13%)
Frame = +1
Query: 142 NASKPE-LEDAFSYYGPLRNVWV-----ARNPPGFAFVEFEDPR 255
+A++PE L F YGP+ +V++ R P GFA+V+FED R
Sbjct: 19 DATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVR 62
>BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L N + +++ FS YG L V + G+ FVEFED R
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSR 46
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.17
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLR--NVWVARNPP----GFAFVEFEDP 252
KV++G L N +K + + FS YG ++ ++ V R P G+A+VEFE+P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.17
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLR--NVWVARNPP----GFAFVEFEDP 252
KV++G L N +K + + FS YG ++ ++ V R P G+A+VEFE+P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L N + +++ FS YG L V + G+ FVEFED R
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSR 46
>AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein.
Length = 261
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 6/44 (13%)
Frame = +1
Query: 142 NASKPE-LEDAFSYYGPLRNVWV-----ARNPPGFAFVEFEDPR 255
+A++PE L F YGP+ +V++ R P GFA+V+FED R
Sbjct: 19 DATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVR 62
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 35.9 bits (79), Expect = 0.17
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLR--NVWVARNPP----GFAFVEFEDP 252
KV++G L N +K + + FS YG ++ ++ V R P G+A+VEFE+P
Sbjct: 139 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 190
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 35.9 bits (79), Expect = 0.17
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLR--NVWVARNPP----GFAFVEFEDP 252
KV++G L N +K + + FS YG ++ ++ V R P G+A+VEFE+P
Sbjct: 85 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 136
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.17
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLR--NVWVARNPP----GFAFVEFEDP 252
KV++G L N +K + + FS YG ++ ++ V R P G+A+VEFE+P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich
splicing factor 6 variant protein.
Length = 279
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L N + +++ FS YG L V + G+ FVEFED R
Sbjct: 37 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSR 80
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
VY+ + G L++ FS +G +V V R+P GF FV +E
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
VY+ + G L++ FS +G +V V R+P GF FV +E
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 34.7 bits (76), Expect = 0.38
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 76 QKASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV---ARNPPGFAFVEFE 246
Q ++RY +YV +L + L AFS +G + + V GF FV F
Sbjct: 282 QMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFS 341
Query: 247 DPRMLKTQYVVWMDGRFAVVEPV 315
P T+ V M+GR +P+
Sbjct: 342 SPEE-ATKAVTEMNGRIVATKPL 363
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
VY+ + G L++ FS +G +V V R+P GF FV +E
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
VY+ + G L++ FS +G +V V R+P GF FV +E
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
VY+ + G L++ FS +G +V V R+P GF FV +E
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 34.7 bits (76), Expect = 0.38
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 76 QKASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV---ARNPPGFAFVEFE 246
Q ++RY +YV +L + L AFS +G + + V GF FV F
Sbjct: 282 QMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFS 341
Query: 247 DPRMLKTQYVVWMDGRFAVVEPV 315
P T+ V M+GR +P+
Sbjct: 342 SPEE-ATKAVTEMNGRIVATKPL 363
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 34.7 bits (76), Expect = 0.38
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 76 QKASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV---ARNPPGFAFVEFE 246
Q ++RY +YV +L + L AFS +G + + V GF FV F
Sbjct: 282 QMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFS 341
Query: 247 DPRMLKTQYVVWMDGRFAVVEPV 315
P T+ V M+GR +P+
Sbjct: 342 SPEE-ATKAVTEMNGRIVATKPL 363
>AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeceptor 116 (GPR116) protein.
Length = 129
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
VY+ + G L++ FS +G +V V R+P GF FV +E
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
VY+ + G L++ FS +G +V V R+P GF FV +E
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
VY+ + G L++ FS +G +V V R+P GF FV +E
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239
>AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleg frame 148 protein.
Length = 129
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
VY+ + G L++ FS +G +V V R+P GF FV +E
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
VY+ + G L++ FS +G +V V R+P GF FV +E
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 34.7 bits (76), Expect = 0.38
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFED 249
++ S Y +YVGDL ++ ++ L + FS GP+ ++ + R G+A+V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 250 P 252
P
Sbjct: 62 P 62
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
VY+ + G L++ FS +G +V V R+P GF FV +E
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 239
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 34.7 bits (76), Expect = 0.38
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 76 QKASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV---ARNPPGFAFVEFE 246
Q ++RY +YV +L + L AFS +G + + V GF FV F
Sbjct: 282 QMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFS 341
Query: 247 DPRMLKTQYVVWMDGRFAVVEPV 315
P T+ V M+GR +P+
Sbjct: 342 SPEE-ATKAVTEMNGRIVATKPL 363
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 34.7 bits (76), Expect = 0.38
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 76 QKASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV---ARNPPGFAFVEFE 246
Q ++RY +YV +L + L AFS +G + + V GF FV F
Sbjct: 282 QMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFS 341
Query: 247 DPRMLKTQYVVWMDGRFAVVEPV 315
P T+ V M+GR +P+
Sbjct: 342 SPEE-ATKAVTEMNGRIVATKPL 363
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.51
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFEDPRMLKT 267
+YVG++ A+ ELE F G + V + + +P GFA++EF D ++T
Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 228
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.51
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWV-----ARNPPGFAFVEFEDPRMLKT 267
+YVG++ A+ ELE F G + V + + +P GFA++EF D ++T
Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 228
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 33.5 bits (73), Expect = 0.89
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +1
Query: 76 QKASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV---ARNPPGFAFVEFE 246
Q ++RY +YV +L + L FS +G + + V GF FV F
Sbjct: 257 QMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFS 316
Query: 247 DPRMLKTQYVVWMDGRFAVVEPV 315
P T+ V M+GR +P+
Sbjct: 317 SPEE-ATKAVTEMNGRIVATKPL 338
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 33.5 bits (73), Expect = 0.89
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +1
Query: 76 QKASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV---ARNPPGFAFVEFE 246
Q ++RY +YV +L + L FS +G + + V GF FV F
Sbjct: 279 QMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFS 338
Query: 247 DPRMLKTQYVVWMDGRFAVVEPV 315
P T+ V M+GR +P+
Sbjct: 339 SPEE-ATKAVTEMNGRIVATKPL 360
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +1
Query: 103 YGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFEDP 252
Y +YVGDL + ++ L + FS GP+ ++ + R G+A+V F+ P
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 33.5 bits (73), Expect = 0.89
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +1
Query: 76 QKASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV---ARNPPGFAFVEFE 246
Q ++RY +YV +L + L FS +G + + V GF FV F
Sbjct: 282 QMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFS 341
Query: 247 DPRMLKTQYVVWMDGRFAVVEPV 315
P T+ V M+GR +P+
Sbjct: 342 SPEE-ATKAVTEMNGRIVATKPL 363
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +1
Query: 103 YGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFEDP 252
Y +YVGDL + ++ L + FS GP+ ++ + R G+A+V F+ P
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 33.5 bits (73), Expect = 0.89
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +1
Query: 76 QKASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV---ARNPPGFAFVEFE 246
Q ++RY +YV +L + L FS +G + + V GF FV F
Sbjct: 282 QMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFS 341
Query: 247 DPRMLKTQYVVWMDGRFAVVEPV 315
P T+ V M+GR +P+
Sbjct: 342 SPEE-ATKAVTEMNGRIVATKPL 363
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +1
Query: 103 YGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFEDP 252
Y +YVGDL + ++ L + FS GP+ ++ + R G+A+V F+ P
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 33.5 bits (73), Expect = 0.89
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +1
Query: 76 QKASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV---ARNPPGFAFVEFE 246
Q ++RY +YV +L + L FS +G + + V GF FV F
Sbjct: 282 QMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFS 341
Query: 247 DPRMLKTQYVVWMDGRFAVVEPV 315
P T+ V M+GR +P+
Sbjct: 342 SPEE-ATKAVTEMNGRIVATKPL 363
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +1
Query: 103 YGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFEDP 252
Y +YVGDL + ++ L + FS GP+ ++ + R G+A+V F+ P
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 33.5 bits (73), Expect = 0.89
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +1
Query: 76 QKASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWV---ARNPPGFAFVEFE 246
Q ++RY +YV +L + L FS +G + + V GF FV F
Sbjct: 282 QMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFS 341
Query: 247 DPRMLKTQYVVWMDGRFAVVEPV 315
P T+ V M+GR +P+
Sbjct: 342 SPEE-ATKAVTEMNGRIVATKPL 363
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +1
Query: 103 YGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV-----WVARNPPGFAFVEFEDP 252
Y +YVGDL + ++ L + FS GP+ ++ + R G+A+V F+ P
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DA +A+RGLD G+R V++S CY CG GH++
Sbjct: 123 DAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSG----------CYRCGKEGHWS 172
Query: 435 RDC 443
++C
Sbjct: 173 KEC 175
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DA +A+RGLD G+R V++S CY CG GH++
Sbjct: 123 DAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSG----------CYRCGKEGHWS 172
Query: 435 RDC 443
++C
Sbjct: 173 KEC 175
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVA-----RNPPGFAFVEFED 249
K++VG + +N + EL + F +G + V + + P GF F+ FED
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 163
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRMLKT 267
K++VG L + ++ L FS YG + + + ++ GF FV+F+DP + T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVW-----VARNPPGFAFVEFEDP 252
+++V +L +++ +LE FS YGPL + + + P GFAF+ F P
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFP 453
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DA +A+RGLD G+R V++S CY CG GH++
Sbjct: 123 DAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSG----------CYRCGKEGHWS 172
Query: 435 RDC 443
++C
Sbjct: 173 KEC 175
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVW-----VARNPPGFAFVEFEDP 252
+++V +L +++ +LE FS YGPL + + + P GFAF+ F P
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFP 453
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DA +A+RGLD G+R V++S CY CG GH++
Sbjct: 123 DAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSG----------CYRCGKEGHWS 172
Query: 435 RDC 443
++C
Sbjct: 173 KEC 175
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 255 DAEDAVRGLDGRTICGRRARVEMSNXXXXXXXXXXXXXXXXXXXXXXXXCYDCGDRGHYA 434
DA +A+RGLD G+R V++S CY CG GH++
Sbjct: 123 DAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSG----------CYRCGKEGHWS 172
Query: 435 RDC 443
++C
Sbjct: 173 KEC 175
>AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ32288 fis, clone PROST2000325, highly similar to
Homo sapiens DAZ associated protein 1 (DAZAP1) mRNA. ).
Length = 289
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVA-----RNPPGFAFVEFED 249
K++VG + +N + EL + F +G + V + + P GF F+ FED
Sbjct: 25 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 74
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVA-----RNPPGFAFVEFED 249
K++VG + +N + EL + F +G + V + + P GF F+ FED
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 163
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRMLKT 267
K++VG L + ++ L FS YG + + + ++ GF FV+F+DP + T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVW-----VARNPPGFAFVEFEDP 252
+++V +L +++ +LE FS YGPL + + + P GFAF+ F P
Sbjct: 416 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFP 466
>X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein.
Length = 419
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN----PPGFAFVEFEDP 252
K+++G L ++ L+ F +GP+ V + ++ GFAF+ FE+P
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENP 58
>X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA for
YRRM1. ).
Length = 496
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN----PPGFAFVEFEDP 252
K+++G L ++ L+ F +GP+ V + ++ GFAF+ FE+P
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENP 58
>U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 220
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN----PPGFAFVEFEDP 252
K+++G L ++ L+ F +GP+ V + ++ GFAF+ FE+P
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENP 58
>BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein.
Length = 459
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN----PPGFAFVEFEDP 252
K+++G L ++ L+ F +GP+ V + ++ GFAF+ FE+P
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENP 58
>BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif protein,
Y-linked, family 1, member F protein.
Length = 496
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN----PPGFAFVEFEDP 252
K+++G L ++ L+ F +GP+ V + ++ GFAF+ FE+P
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENP 58
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 97 SRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
S Y +YVGDL + ++ L + FS GP+ ++ V R+ G+A++ F+ P
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG----FAFVEFEDPRMLKTQYVVWM 285
+YV +L + + L+D FS +G + +V V R+ G F FV FE + + VV M
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQ-KAVVHM 251
Query: 286 DGR 294
+G+
Sbjct: 252 NGK 254
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 97 SRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
S Y +YVGDL + ++ L + FS GP+ ++ V R+ G+A++ F+ P
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG----FAFVEFEDPRMLKTQYVVWM 285
+YV +L + + L+D FS +G + +V V R+ G F FV FE + + VV M
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQ-KAVVHM 251
Query: 286 DGR 294
+G+
Sbjct: 252 NGK 254
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 97 SRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
S Y +YVGDL + ++ L + FS GP+ ++ V R+ G+A++ F+ P
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG----FAFVEFEDPRMLKTQYVVWM 285
+YV +L + + L+D FS +G + +V V R+ G F FV FE + + VV M
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQ-KAVVHM 251
Query: 286 DGR 294
+G+
Sbjct: 252 NGK 254
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 97 SRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
S Y +YVGDL + ++ L + FS GP+ ++ V R+ G+A++ F+ P
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPG----FAFVEFEDPRMLKTQYVVWM 285
+YV +L + + L+D FS +G + +V V R+ G F FV FE + + VV M
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQ-KAVVHM 251
Query: 286 DGR 294
+G+
Sbjct: 252 NGK 254
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFED 249
+S S + CK+++G L ++ L + F +G ++ V R+P GF FV F D
Sbjct: 11 ASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD 70
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 85 SSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP-----PGFAFVEFED 249
+S S + CK+++G L ++ L + F +G ++ V R+P GF FV F D
Sbjct: 11 ASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD 70
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFED 249
K++VG L + ++ LE FS YG + V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFED 249
K++VG L + ++ LE FS YG + V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein.
Length = 450
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDP 252
D +++ GDLGN + L AFS + V R+ G+ FV F+DP
Sbjct: 350 DFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDP 402
>BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein
MGC10433 protein.
Length = 480
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDP 252
D +++ GDLGN + L AFS + V R+ G+ FV F+DP
Sbjct: 380 DFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDP 432
>BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein.
Length = 451
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDP 252
D +++ GDLGN + L AFS + V R+ G+ FV F+DP
Sbjct: 351 DFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDP 403
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFED 249
K++VG L + ++ LE FS YG + V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFED 249
K++VG L + ++ LE FS YG + V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ46566 fis, clone THYMU3040829, moderately
similar to Cold-inducible RNA-binding protein. ).
Length = 135
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFED 249
K++VG L + ++ LE FS YG + V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFED 249
K++VG L + ++ LE FS YG + V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFED 249
K++VG L + ++ LE FS YG + V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein.
Length = 339
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +1
Query: 109 DCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDP 252
D +++ GDLGN + L AFS + V R+ G+ FV F+DP
Sbjct: 239 DFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDP 291
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 31.9 bits (69), Expect = 2.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
K+++G L ++ LE F YG + V + ++ GFAFV FE P
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESP 59
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 31.9 bits (69), Expect = 2.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
K+++G L ++ LE F YG + V + ++ GFAFV FE P
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESP 59
>AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein
protein.
Length = 899
Score = 31.9 bits (69), Expect = 2.7
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GHYA+DC
Sbjct: 854 CYNCGVSGHYAQDC 867
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 31.9 bits (69), Expect = 2.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
K+++G L ++ LE F YG + V + ++ GFAFV FE P
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESP 59
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 31.9 bits (69), Expect = 2.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
K+++G L ++ LE F YG + V + ++ GFAFV FE P
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESP 59
>AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ20281 fis, clone HEP03769. ).
Length = 298
Score = 31.9 bits (69), Expect = 2.7
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GHYA+DC
Sbjct: 253 CYNCGVSGHYAQDC 266
>AF020307-1|AAC39543.1| 189|Homo sapiens HRS protein.
Length = 189
Score = 31.9 bits (69), Expect = 2.7
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFED 249
C+V++G L A + ++E F YG +R++ + R GF FV+ D
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVDPRD 46
>AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein.
Length = 855
Score = 31.9 bits (69), Expect = 2.7
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GHYA+DC
Sbjct: 810 CYNCGVSGHYAQDC 823
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
K+++G L ++ LE F YG + V + ++ GFAFV FE P
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESP 59
>X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1)
ribonucleoprotein protein.
Length = 437
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRMLKTQY 273
++V + + ++ +L F YGP++ + + + P G+AF+E+E R + + Y
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAY 161
>X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for
hU1-70K snRNP protein (RNP8). ).
Length = 301
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRMLKTQY 273
++V + + ++ +L F YGP++ + + + P G+AF+E+E R + + Y
Sbjct: 56 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAY 112
>X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for U1
RNA-associated 70K protein. ).
Length = 614
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRMLKTQY 273
++V + + ++ +L F YGP++ + + + P G+AF+E+E R + + Y
Sbjct: 282 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAY 338
>M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen
protein.
Length = 428
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRMLKTQY 273
++V + + ++ +L F YGP++ + + + P G+AF+E+E R + + Y
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAY 161
>M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen
protein.
Length = 437
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRMLKTQY 273
++V + + ++ +L F YGP++ + + + P G+AF+E+E R + + Y
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAY 161
>M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small
nuclear ribonucleoprotein 70 kd protein mRNA, complete
cds. ).
Length = 437
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRMLKTQY 273
++V + + ++ +L F YGP++ + + + P G+AF+E+E R + + Y
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAY 161
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.6
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 82 ASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEF 243
A R D VYVG L S+P L + F GP+ N + ++ G+ FVEF
Sbjct: 3 AGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L A + ++E F YG + V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>EF434183-1|ABO32292.1| 260|Homo sapiens TDP43 splice variant 2
protein.
Length = 260
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 139 NNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKT 267
N EL + FS YG + +V++ + FAFV F D ++ ++
Sbjct: 81 NKRKMDELRELFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQS 123
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L A + ++E F YG + V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
K + + SR D K++VG LG + ++ F +G + V R P G AFV+F+
Sbjct: 84 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.6
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 82 ASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEF 243
A R D VYVG L S+P L + F GP+ N + ++ G+ FVEF
Sbjct: 3 AGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 31.5 bits (68), Expect = 3.6
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
K + + SR GD K++VG LG + ++ F +G + V R P G AFV+F+
Sbjct: 27 KPADSESR-GDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 85
>BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 464
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
K + + SR D K++VG LG + ++ F +G + V R P G AFV+F+
Sbjct: 84 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.6
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 82 ASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEF 243
A R D VYVG L S+P L + F GP+ N + ++ G+ FVEF
Sbjct: 3 AGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
K+++G L ++ LE F YG + V + ++ GFAFV FE P
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESP 59
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
K+++G L ++ LE F YG + V + ++ GFAFV FE P
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESP 59
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.6
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 82 ASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEF 243
A R D VYVG L S+P L + F GP+ N + ++ G+ FVEF
Sbjct: 3 AGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
>BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein.
Length = 291
Score = 31.5 bits (68), Expect = 3.6
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
K + + SR GD K++VG LG + ++ F +G + V R P G AFV+F+
Sbjct: 76 KPADSESR-GDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 134
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L A + ++E F YG + V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear
ribonucleoprotein 70kDa polypeptide (RNP antigen)
protein.
Length = 437
Score = 31.5 bits (68), Expect = 3.6
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFEDPRMLKTQY 273
++V + + ++ +L F YGP++ + + + P G+AF+E+E R + + Y
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAY 161
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
K+++G L ++ LE F YG + V + ++ GFAFV FE P
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESP 59
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
K + + SR D K++VG LG + ++ F +G + V R P G AFV+F+
Sbjct: 84 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
K+++G L ++ LE F YG + V + ++ GFAFV FE P
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESP 59
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.6
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 82 ASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEF 243
A R D VYVG L S+P L + F GP+ N + ++ G+ FVEF
Sbjct: 3 AGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L A + ++E F YG + V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.6
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 82 ASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEF 243
A R D VYVG L S+P L + F GP+ N + ++ G+ FVEF
Sbjct: 3 AGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 3.6
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
K + + SR GD K++VG LG + ++ F +G + V R P G AFV+F+
Sbjct: 85 KPADSESR-GDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 415
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
K + + SR D K++VG LG + ++ F +G + V R P G AFV+F+
Sbjct: 84 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
K + + SR D K++VG LG + ++ F +G + V R P G AFV+F+
Sbjct: 84 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L A + ++E F YG + V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L A + ++E F YG + V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.6
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 82 ASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEF 243
A R D VYVG L S+P L + F GP+ N + ++ G+ FVEF
Sbjct: 3 AGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEF 61
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
K + + SR D K++VG LG + ++ F +G + V R P G AFV+F+
Sbjct: 84 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDP 252
K+++G L ++ LE F YG + V + ++ GFAFV FE P
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESP 59
>AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein.
Length = 192
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPR 255
+VY+G L A + ++E F YG + V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
K + + SR D K++VG LG + ++ F +G + V R P G AFV+F+
Sbjct: 60 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 119
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEFE 246
VY+ + G L++ FS +G +V V R+P GF FV +E
Sbjct: 4 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYE 50
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKTQYVVWMDG 291
C+++VG+L + ++ + + F YG V++ R+ GF F+ E R L +DG
Sbjct: 46 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLES-RTLAEIAKAELDG 103
Query: 292 RFAVVEPV 315
P+
Sbjct: 104 TILKSRPL 111
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKTQYVVWMDG 291
C+++VG+L + ++ + + F YG V++ R+ GF F+ E R L +DG
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLES-RTLAEIAKAELDG 139
Query: 292 RFAVVEPV 315
P+
Sbjct: 140 TILKSRPL 147
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKTQYVVWMDG 291
C+++VG+L + ++ + + F YG V++ R+ GF F+ E R L +DG
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLES-RTLAEIAKAELDG 139
Query: 292 RFAVVEPV 315
P+
Sbjct: 140 TILKSRPL 147
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKTQYVVWMDG 291
C+++VG+L + ++ + + F YG V++ R+ GF F+ E R L +DG
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLES-RTLAEIAKAELDG 139
Query: 292 RFAVVEPV 315
P+
Sbjct: 140 TILKSRPL 147
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKTQYVVWMDG 291
C+++VG+L + ++ + + F YG V++ R+ GF F+ E R L +DG
Sbjct: 46 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLES-RTLAEIAKAELDG 103
Query: 292 RFAVVEPV 315
P+
Sbjct: 104 TILKSRPL 111
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKTQYVVWMDG 291
C+++VG+L + ++ + + F YG V++ R+ GF F+ E R L +DG
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLES-RTLAEIAKAELDG 139
Query: 292 RFAVVEPV 315
P+
Sbjct: 140 TILKSRPL 147
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRMLKTQYVVWMDG 291
C+++VG+L + ++ + + F YG V++ R+ GF F+ E R L +DG
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLES-RTLAEIAKAELDG 139
Query: 292 RFAVVEPV 315
P+
Sbjct: 140 TILKSRPL 147
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPL---RNVW--VARNPPGFAFVEFED 249
V+VG++ A++ +L+D FS GP+ R V+ P G+ F E++D
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPL---RNVW--VARNPPGFAFVEFED 249
V+VG++ A++ +L+D FS GP+ R V+ P G+ F E++D
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
>U79569-1|AAD00321.1| 269|Homo sapiens no arches protein.
Length = 269
Score = 30.7 bits (66), Expect = 6.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY CG++GHYA C
Sbjct: 245 CYKCGEKGHYANRC 258
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GH ARDC
Sbjct: 98 CYNCGKPGHLARDC 111
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPL---RNVW--VARNPPGFAFVEFED 249
V+VG++ A++ +L+D FS GP+ R V+ P G+ F E++D
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GH ARDC
Sbjct: 98 CYNCGKPGHLARDC 111
>EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 269
Score = 30.7 bits (66), Expect = 6.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY CG++GHYA C
Sbjct: 245 CYKCGEKGHYANRC 258
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GH ARDC
Sbjct: 93 CYNCGKPGHLARDC 106
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GH ARDC
Sbjct: 92 CYNCGKPGHLARDC 105
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GH ARDC
Sbjct: 99 CYNCGKPGHLARDC 112
>CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein.
Length = 269
Score = 30.7 bits (66), Expect = 6.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY CG++GHYA C
Sbjct: 245 CYKCGEKGHYANRC 258
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GH ARDC
Sbjct: 99 CYNCGKPGHLARDC 112
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPL---RNVW--VARNPPGFAFVEFED 249
V+VG++ A++ +L+D FS GP+ R V+ P G+ F E++D
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFED 249
K++VG + + + L D F YG + + V + GFAFV F+D
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDD 176
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFED 249
K++VG + + + L D F YG + + V + GFAFV F+D
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDD 176
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GH ARDC
Sbjct: 98 CYNCGKPGHLARDC 111
>BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein.
Length = 243
Score = 30.7 bits (66), Expect = 6.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY CG++GHYA C
Sbjct: 219 CYKCGEKGHYANRC 232
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPL---RNVW--VARNPPGFAFVEFED 249
V+VG++ A++ +L+D FS GP+ R V+ P G+ F E++D
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 65
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 118 VYVGDLGNNASKPELEDAFSYYGPL---RNVW--VARNPPGFAFVEFED 249
V+VG++ A++ +L+D FS GP+ R V+ P G+ F E++D
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GH ARDC
Sbjct: 91 CYNCGKPGHLARDC 104
>BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 244
Score = 30.7 bits (66), Expect = 6.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY CG++GHYA C
Sbjct: 220 CYKCGEKGHYANRC 233
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GH ARDC
Sbjct: 91 CYNCGKPGHLARDC 104
>AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion
protein protein.
Length = 454
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPP-----GFAFVEFEDPRMLKT 267
K++VG L + ++ L FS YG + + + ++ GF FV+F+DP + T
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFED 249
K++VG + + + L D F YG + + V + GFAFV F+D
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDD 176
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GH ARDC
Sbjct: 98 CYNCGKPGHLARDC 111
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 30.7 bits (66), Expect = 6.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 402 CYDCGDRGHYARDC 443
CY+CG GH ARDC
Sbjct: 88 CYNCGKPGHLARDC 101
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = +1
Query: 115 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARN-----PPGFAFVEFED 249
K++VG + + + L D F YG + + V + GFAFV F+D
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDD 176
>AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein
protein.
Length = 544
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 67 LTIQKASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGF----AF 234
+ ++ A S + D K+++G + ++ ++ FS +G + + R P G AF
Sbjct: 151 IQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAF 210
Query: 235 VEFEDPRMLKT 267
V F M +T
Sbjct: 211 VTFTTRAMAQT 221
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFE 246
C+++VG+L + ++ E + F+ YG V++ + GF F++ E
Sbjct: 297 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLE 340
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 100 RYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVW-----VARNPPGFAFVEFEDP 252
+Y +YVGDL + ++ L F GPLR V R+P G+ +V F P
Sbjct: 14 KYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFP 69
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFE 246
C+++VG+L + ++ E + F+ YG V++ + GF F++ E
Sbjct: 297 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLE 340
>BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA binding
protein (Drosophila) protein.
Length = 481
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEF 243
K +++ R D K++VG LG + ++ F +G + V R+P G AFV+F
Sbjct: 123 KPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKF 181
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFE 246
C+++VG+L + ++ E + F+ YG V++ + GF F++ E
Sbjct: 297 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLE 340
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFE 246
C+++VG+L + ++ E + F+ YG V++ + GF F++ E
Sbjct: 224 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLE 267
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 100 RYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVW-----VARNPPGFAFVEFEDP 252
+Y +YVGDL + ++ L F GPLR V R+P G+ +V F P
Sbjct: 14 KYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFP 69
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +1
Query: 112 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFE 246
C+++VG+L + ++ E + F+ YG V++ + GF F++ E
Sbjct: 297 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLE 340
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 100 RYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVW-----VARNPPGFAFVEFEDP 252
+Y +YVGDL + ++ L F GPLR V R+P G+ +V F P
Sbjct: 14 KYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFP 69
>AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CELF6
protein.
Length = 481
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEF 243
K +++ R D K++VG LG + ++ F +G + V R+P G AFV+F
Sbjct: 123 KPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKF 181
>AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-binding
protein protein.
Length = 481
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +1
Query: 79 KASSTMSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNP----PGFAFVEF 243
K +++ R D K++VG LG + ++ F +G + V R+P G AFV+F
Sbjct: 123 KPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKF 181
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,226,444
Number of Sequences: 237096
Number of extensions: 1985763
Number of successful extensions: 4255
Number of sequences better than 10.0: 249
Number of HSP's better than 10.0 without gapping: 3766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4202
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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