Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10995
         (382 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125767-1|BAC86280.1|  168|Homo sapiens protein ( Homo sapiens ...    29   3.8  
BC029819-1|AAH29819.1|  483|Homo sapiens dual oxidase maturation...    28   8.7  

>AK125767-1|BAC86280.1|  168|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43779 fis, clone TESTI2051488. ).
          Length = 168

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 23/83 (27%), Positives = 26/83 (31%)
 Frame = +3

Query: 27  HGASSCISGKRGRRCCNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFSGRQH 206
           H +  C    R R CC+  H     S  GSR     S   G     C          R H
Sbjct: 82  HTSRRCGGSSRSRECCSSLH-----SSRGSRGSSWSSSPPGSTCRWCSCHSHHHSHHRSH 136

Query: 207 CVTVDCCCHGSPHAMRDAKHHPF 275
             +  C  H S H      HH F
Sbjct: 137 HRSHHCSHHHSHHHSGHHSHHNF 159


>BC029819-1|AAH29819.1|  483|Homo sapiens dual oxidase maturation
           factor 1 protein.
          Length = 483

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +3

Query: 57  RGRRCCNIWHWGSVD-SISGSRARF-QLSGNSGRKHSRC 167
           RGR    +W WGS +    G RA   +L  NSG K   C
Sbjct: 411 RGRGTGRLWRWGSKERRACGVRAMLPRLVSNSGLKRPSC 449


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,347,968
Number of Sequences: 237096
Number of extensions: 1084358
Number of successful extensions: 2068
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2063
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)