Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10993
(571 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 33 0.001
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 33 0.001
AY600516-1|AAT11864.1| 143|Tribolium castaneum optomotor-blind-... 23 2.4
AY600515-1|AAT11863.1| 134|Tribolium castaneum optomotor-blind-... 23 2.4
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 23 2.4
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 22 3.2
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 22 3.2
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 22 3.2
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 22 4.2
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 22 4.2
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 22 4.2
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 33.5 bits (73), Expect = 0.001
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 47 NFFRNKLKLMSFLRKRCNVNPARGPFHFRAP--SKILWKTVRGMI 175
N+ + ++ +SF K CN+ P+ F P K LWK ++G++
Sbjct: 5 NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 33.5 bits (73), Expect = 0.001
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 47 NFFRNKLKLMSFLRKRCNVNPARGPFHFRAP--SKILWKTVRGMI 175
N+ + ++ +SF K CN+ P+ F P K LWK ++G++
Sbjct: 5 NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49
>AY600516-1|AAT11864.1| 143|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 143
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 484 MVLSPSTPSHQHPW*SS*VSFHR 416
M + P +PS W VSFH+
Sbjct: 54 MYIHPDSPSTGEQWMQKVVSFHK 76
>AY600515-1|AAT11863.1| 134|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 134
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 484 MVLSPSTPSHQHPW*SS*VSFHR 416
M + P +PS W VSFH+
Sbjct: 54 MYIHPDSPSTGEQWMQKVVSFHK 76
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -2
Query: 231 PSYVRSLLRAFLPRSVLCGIIPLTVFH 151
PS+ S +R+FL + ++P ++H
Sbjct: 34 PSFKLSKIRSFLNITASAVLLPFAIYH 60
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 509 IQLGLRNYNKNKPFGCQK 562
++ LRN+ +KPF C K
Sbjct: 246 LEYHLRNHAGSKPFQCNK 263
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 509 IQLGLRNYNKNKPFGCQK 562
++ LRN+ +KPF C K
Sbjct: 4 LEYHLRNHAGSKPFQCNK 21
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/31 (25%), Positives = 18/31 (58%)
Frame = -1
Query: 292 RRHVEQQALQHVEVIKGRRAPIICT*PPKSI 200
++H +QQ+++ +K + API+ P +
Sbjct: 129 KQHNQQQSVEKSSKLKNKSAPILTKTSPTPV 159
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 21.8 bits (44), Expect = 4.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 435 LKFLFIGNSLNSLALPLVFKLTNNITVFPSNFMGQSAYMTVIT 307
L L I SL L L +VF LT + + +AY+ +IT
Sbjct: 125 LSTLIIIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHIIT 167
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 21.8 bits (44), Expect = 4.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 435 LKFLFIGNSLNSLALPLVFKLTNNITVFPSNFMGQSAYMTVIT 307
L L I SL L L +VF LT + + +AY+ +IT
Sbjct: 125 LSTLIIIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHIIT 167
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 21.8 bits (44), Expect = 4.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 435 LKFLFIGNSLNSLALPLVFKLTNNITVFPSNFMGQSAYMTVIT 307
L L I SL L L +VF LT + + +AY+ +IT
Sbjct: 125 LSTLIIIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHIIT 167
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,420
Number of Sequences: 336
Number of extensions: 3035
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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