Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10993
(571 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051640-1|AAK93064.1| 205|Drosophila melanogaster GM13948p pro... 138 5e-33
AE014297-307|AAF51987.1| 205|Drosophila melanogaster CG1475-PB ... 138 5e-33
AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p pro... 30 1.9
AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-P... 30 1.9
AY058601-1|AAL13830.1| 1148|Drosophila melanogaster LD29239p pro... 29 3.3
AE014298-2906|AAF48996.2| 2111|Drosophila melanogaster CG14215-P... 29 3.3
AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell fa... 29 5.8
>AY051640-1|AAK93064.1| 205|Drosophila melanogaster GM13948p
protein.
Length = 205
Score = 138 bits (334), Expect = 5e-33
Identities = 57/81 (70%), Positives = 72/81 (88%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
KV VVRCE++N+SG+F+RNK+K +++LRKRCNVNPARGPFHFRAPS+I +K VRGMIPHK
Sbjct: 34 KVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHK 93
Query: 185 TERGKNALRRLRTYDGCPPPF 247
T+RG+ AL RLR +DG P P+
Sbjct: 94 TKRGQAALARLRVFDGIPSPY 114
Score = 82.2 bits (194), Expect = 4e-16
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = +1
Query: 295 LKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKA 474
L+ R YC VGRLSHE+GW Y+DV++ LE KRK K + + ++LK++T A E ++KA
Sbjct: 131 LRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELKKLTVKARENIAKA 190
Query: 475 TTPFTTIIQSY 507
PF II+SY
Sbjct: 191 AEPFNKIIKSY 201
>AE014297-307|AAF51987.1| 205|Drosophila melanogaster CG1475-PB
protein.
Length = 205
Score = 138 bits (334), Expect = 5e-33
Identities = 57/81 (70%), Positives = 72/81 (88%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
KV VVRCE++N+SG+F+RNK+K +++LRKRCNVNPARGPFHFRAPS+I +K VRGMIPHK
Sbjct: 34 KVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHK 93
Query: 185 TERGKNALRRLRTYDGCPPPF 247
T+RG+ AL RLR +DG P P+
Sbjct: 94 TKRGQAALARLRVFDGIPSPY 114
Score = 82.2 bits (194), Expect = 4e-16
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = +1
Query: 295 LKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKA 474
L+ R YC VGRLSHE+GW Y+DV++ LE KRK K + + ++LK++T A E ++KA
Sbjct: 131 LRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELKKLTVKARENIAKA 190
Query: 475 TTPFTTIIQSY 507
PF II+SY
Sbjct: 191 AEPFNKIIKSY 201
>AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p protein.
Length = 1843
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 347 DGNTVMLFVSLKTRGRARLLRELPMKRNLRGSPRMLVR--RCRRRQHHSLPSSNPMIQLG 520
DGN V L T G LR RN R P +R CR+R H S P +
Sbjct: 1519 DGNECSSSVRLSTCGVC--LRS--QHRNARDMPEAFIRCYTCRKRVHPSCVDMPPRMVGR 1574
Query: 521 LRNYN 535
+RNYN
Sbjct: 1575 VRNYN 1579
>AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-PA
protein.
Length = 2006
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 347 DGNTVMLFVSLKTRGRARLLRELPMKRNLRGSPRMLVR--RCRRRQHHSLPSSNPMIQLG 520
DGN V L T G LR RN R P +R CR+R H S P +
Sbjct: 1682 DGNECSSSVRLSTCGVC--LRS--QHRNARDMPEAFIRCYTCRKRVHPSCVDMPPRMVGR 1737
Query: 521 LRNYN 535
+RNYN
Sbjct: 1738 VRNYN 1742
>AY058601-1|AAL13830.1| 1148|Drosophila melanogaster LD29239p protein.
Length = 1148
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 380 KTRGRARLLRELPMKRNLRGSPRMLVRRCRRRQHHSLPSSNPMIQLGLRNYNK 538
+TR R RL + + G+P M R +R + P+++P ++ LR +++
Sbjct: 979 RTRSRTRLSVDSEATSSRPGTPTMTKARGKRATSQAPPTASPSVRRSLRGHSE 1031
>AE014298-2906|AAF48996.2| 2111|Drosophila melanogaster CG14215-PA
protein.
Length = 2111
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 380 KTRGRARLLRELPMKRNLRGSPRMLVRRCRRRQHHSLPSSNPMIQLGLRNYNK 538
+TR R RL + + G+P M R +R + P+++P ++ LR +++
Sbjct: 1942 RTRSRTRLSVDSEATSSRPGTPTMTKARGKRATSQAPPTASPSVRRSLRGHSE 1994
>AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell factor
HCF protein.
Length = 1500
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Frame = +2
Query: 311 ITVM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKR----NLRGSPRMLVRRCRRRQ 478
+TVM + M GN VM+ + L K+ N GSPR + +
Sbjct: 919 VTVMSTNTSMAASGNKVMVLPGTSSNNSPATTTALSAKKSFVFNAGGSPRTVTLATKSIN 978
Query: 479 HHSLPSSNPMIQ 514
S+P S P+ +
Sbjct: 979 AKSIPQSQPVTE 990
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,898,174
Number of Sequences: 53049
Number of extensions: 566293
Number of successful extensions: 1539
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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