Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10992
         (579 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   0.58 
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   7.2  
AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding pr...    23   9.5  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.6 bits (56), Expect = 0.58
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +1

Query: 367 VRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYDTIRTK 525
           ++KL D+ +   VKR A+E ++   +K  G  V         ++Q YD ++ K
Sbjct: 343 IKKLVDELQEVEVKRAAFENEVAGESKKRGSNVHLE----RDLVQEYDRLKQK 391


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 390 PLVFKLTNNITVFPSNFMGQSAYMTVITARFQTE 289
           PLV K +NN TV  +       Y+  +T  F  E
Sbjct: 279 PLVVKKSNNHTVLITQARSFGKYVGRLTVNFDCE 312


>AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding
           protein AgamOBP11 protein.
          Length = 192

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 400 PCPSSCLQAYEQ 365
           PCP  C  AY+Q
Sbjct: 144 PCPDRCTAAYKQ 155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,604
Number of Sequences: 2352
Number of extensions: 12299
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)