Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10991
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    24   1.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    24   1.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    24   1.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.5  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 584 RDFTGVRTSCESARVGTTILPI 649
           RDF  +  +  SARVG TI+ I
Sbjct: 58  RDFRAIHFTWASARVGYTIVTI 79


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 584 RDFTGVRTSCESARVGTTILPI 649
           RDF  +  +  SARVG TI+ I
Sbjct: 58  RDFRAIHFTWASARVGYTIVTI 79


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 584 RDFTGVRTSCESARVGTTILPI 649
           RDF  +  +  SARVG TI+ I
Sbjct: 58  RDFRAIHFTWASARVGYTIVTI 79


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -1

Query: 382 HGLNKI*TPNSIRHIQFTTHLKCT 311
           H L+ +  P  + H +   H KC+
Sbjct: 287 HALSGLKAPPGVEHFEDVVHKKCS 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,414
Number of Sequences: 336
Number of extensions: 3674
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)