Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10991
         (742 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011188-1|AAR88549.1| 1034|Drosophila melanogaster RE06749p pro...    32   0.94 
AF002164-1|AAC14585.1| 1034|Drosophila melanogaster AP-3 delta-a...    32   0.94 
AE014298-1950|AAF48307.2| 1034|Drosophila melanogaster CG10986-P...    32   0.94 

>BT011188-1|AAR88549.1| 1034|Drosophila melanogaster RE06749p protein.
          Length = 1034

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -2

Query: 618  DSQEVLTPVKSRDHAKRPSQRKD*KKPRPTSSVCFILSFD*Y---IGIS 481
            ++ EV + V  + H K  SQRK+ KK   ++SV  I+S   Y   +GIS
Sbjct: 979  EASEVASKVHKKKHKKEKSQRKEKKKASESASVSAIVSIGDYEQPLGIS 1027


>AF002164-1|AAC14585.1| 1034|Drosophila melanogaster AP-3
            delta-adaptin subunit protein.
          Length = 1034

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -2

Query: 618  DSQEVLTPVKSRDHAKRPSQRKD*KKPRPTSSVCFILSFD*Y---IGIS 481
            ++ EV + V  + H K  SQRK+ KK   ++SV  I+S   Y   +GIS
Sbjct: 979  EASEVASKVHKKKHKKEKSQRKEKKKASESASVSAIVSIGDYEQPLGIS 1027


>AE014298-1950|AAF48307.2| 1034|Drosophila melanogaster CG10986-PB
            protein.
          Length = 1034

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -2

Query: 618  DSQEVLTPVKSRDHAKRPSQRKD*KKPRPTSSVCFILSFD*Y---IGIS 481
            ++ EV + V  + H K  SQRK+ KK   ++SV  I+S   Y   +GIS
Sbjct: 979  EASEVASKVHKKKHKKEKSQRKEKKKASESASVSAIVSIGDYEQPLGIS 1027


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,684,666
Number of Sequences: 53049
Number of extensions: 606328
Number of successful extensions: 1048
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)