Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10990
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.51 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.6  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   3.6  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   4.8  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   6.3  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 23  CRNRQGGGTYPCGLTRGLTTTHCSIITM 106
           CR   GGG Y C    G   T+C I T+
Sbjct: 391 CRISDGGG-YICDCPSGTNGTNCEIDTI 417


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 79  HHSLLHNNYGKLRPL 123
           HH  LHN Y  ++P+
Sbjct: 14  HHDTLHNIYTSMKPV 28


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 79  HHSLLHNNYGKLRPL 123
           HH  LHN Y  ++P+
Sbjct: 14  HHDTLHNIYTSMKPV 28


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 194 YNDLYFHYFQHLAFTLKNGFQTP 262
           YN  Y+ Y Q+ A   K  F+ P
Sbjct: 38  YNPYYYQYLQNAALYHKLQFRGP 60


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 361 YYKMYCANF*LFNLSFKI 414
           Y ++YC     F +SF+I
Sbjct: 62  YVRIYCKEIRFFEISFEI 79


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
          transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 72 PLVSPHG*VPPP 37
          P V PH  VPPP
Sbjct: 12 PTVLPHQEVPPP 23


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 141 FDVHCVLQEKTSQIENL 191
           F +HC+LQE+     N+
Sbjct: 85  FKIHCLLQEQQQAGANM 101


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 48  VPPPCLFLQ 22
           VPPP +FLQ
Sbjct: 202 VPPPLMFLQ 210


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 48  VPPPCLFLQ 22
           VPPP +FLQ
Sbjct: 435 VPPPLMFLQ 443


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 48  VPPPCLFLQ 22
           VPPP +FLQ
Sbjct: 435 VPPPLMFLQ 443


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,519
Number of Sequences: 336
Number of extensions: 2212
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)