Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10989
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.48 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    25   0.84 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 608 W*NLILSKWKVNPLCYYLTTFDSFCYKIFTKDILKI 715
           W N ++++WK       +  FD  C   +TK   KI
Sbjct: 455 WINSVINRWKFIEFIRKVLEFDVKCVSNYTKQQSKI 490


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 317 VRASVRGARTFRCI 358
           +R  ++GARTFRC+
Sbjct: 35  LREGLKGARTFRCV 48


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 286 APNLYLCICVRACLCARRP 342
           A N   C C+R C  A+RP
Sbjct: 184 ASNGNKCCCLRTCSSAKRP 202


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 281 CRLLTYICVYVCVRASVRGARTFRCIHYIY 370
           C L+  +C+Y   RA +     F C   +Y
Sbjct: 290 CALIILLCIYYFCRAFIIFPTHFYCAFSLY 319


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 567 CVNDLIKYYYIS 602
           C+N LI YY+IS
Sbjct: 391 CLNTLIFYYHIS 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,588
Number of Sequences: 336
Number of extensions: 3397
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)