Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10989
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF014939-3|AAB63927.1|  831|Caenorhabditis elegans Hypothetical ...    31   0.85 
U00035-3|AAA50645.1|  548|Caenorhabditis elegans Egg sterile (un...    29   2.6  
U41009-8|AAA82282.2|  500|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z71178-12|CAD44086.1|  342|Caenorhabditis elegans Hypothetical p...    29   4.5  

>AF014939-3|AAB63927.1|  831|Caenorhabditis elegans Hypothetical
           protein ZC132.4 protein.
          Length = 831

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 614 NLILSKWKVNPLCYYLTTFDSFCYKIFTKDILKIKCF 724
           N+ +S W  N  CY   +  S CYK  T     ++CF
Sbjct: 386 NVTMSAWISNEKCYVKASHASGCYKCATGSSATLQCF 422


>U00035-3|AAA50645.1|  548|Caenorhabditis elegans Egg sterile
           (unfertilizable) protein2 protein.
          Length = 548

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 205 EKFNCSGTKGRRPVCVACDGIS 270
           ++F CSG+    P+ V CDG+S
Sbjct: 219 DQFKCSGSDACLPISVKCDGVS 240


>U41009-8|AAA82282.2|  500|Caenorhabditis elegans Hypothetical
           protein C06E7.4 protein.
          Length = 500

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 396 HWKIPKNVYSVSASSQPEATPRSLAPCTF 482
           HW   +  YS + S  PEA  R +AP  F
Sbjct: 14  HWMHQRTSYSTTTSPYPEAKQRPIAPGAF 42


>Z71178-12|CAD44086.1|  342|Caenorhabditis elegans Hypothetical
           protein B0024.15 protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 378 VREKKNHWKIPKNVYS 425
           VREKK+ W +PK +YS
Sbjct: 221 VREKKHRWYVPKTLYS 236


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,940,612
Number of Sequences: 27780
Number of extensions: 290832
Number of successful extensions: 740
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)