Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10989
(737 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 2.3
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 2.3
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 2.3
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 2.3
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 5.2
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 22 6.9
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 22 6.9
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 6.9
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 6.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 9.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 9.1
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -3
Query: 594 NNILLSHLHKYNYNAVSIN--LIYSFNRV 514
NN + ++ +KYNYN + N L Y+ N +
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYNINYI 115
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -3
Query: 594 NNILLSHLHKYNYNAVSIN--LIYSFNRV 514
NN + ++ +KYNYN + N L Y+ N +
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYNINYI 115
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -3
Query: 594 NNILLSHLHKYNYNAVSIN--LIYSFNRV 514
NN + ++ +KYNYN + N L Y+ N +
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYNINYI 115
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -3
Query: 594 NNILLSHLHKYNYNAVSIN--LIYSFNRV 514
NN + ++ +KYNYN + N L Y+ N +
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYNINYI 115
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 623 LSKWKVNPLCYYLTTFDSFCYKIFTKDIL 709
++ WK YY+T D+ ++ F K+++
Sbjct: 75 IALWKFETAKYYVTIIDAPGHRDFIKNMI 103
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 623 LSKWKVNPLCYYLTTFDSFCYKIFTKDIL 709
++ WK YY+T D+ ++ F K+++
Sbjct: 2 IALWKFETSKYYVTIIDAPGHRDFIKNMI 30
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 623 LSKWKVNPLCYYLTTFDSFCYKIFTKDIL 709
++ WK YY+T D+ ++ F K+++
Sbjct: 18 IALWKFETSKYYVTIIDAPGHRDFIKNMI 46
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +2
Query: 623 LSKWKVNPLCYYLTTFDSFCYKIFTKDIL 709
++ WK YY+T D+ ++ F K+++
Sbjct: 75 IALWKFETSKYYVTIIDAPGHRDFIKNMI 103
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 6.9
Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +1
Query: 205 EKFNCSGTKGRRPVCVACDGISVGLVSAPN--LYLCICVRACLCARRP 342
E + ++ P GI +PN + +C+C+R C RP
Sbjct: 69 ESYLAESSRSIDPCASKYCGIGKECELSPNSTIAVCVCMRKCPRRHRP 116
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 594 NNILLSHLHKYNYNAVSIN 538
NN + ++ +KYNYN + N
Sbjct: 86 NNTIHNNNYKYNYNNNNYN 104
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 594 NNILLSHLHKYNYNAVSIN 538
NN + ++ +KYNYN + N
Sbjct: 86 NNTIHNNNYKYNYNNNNYN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,749
Number of Sequences: 438
Number of extensions: 3709
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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