Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10987
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. 61 7e-10
AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated... 61 7e-10
L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. 58 7e-09
AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated... 58 7e-09
AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated... 56 4e-08
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 29 3.7
AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical ... 29 3.7
AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical... 29 3.7
AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical ... 29 4.8
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 28 8.5
AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical ... 28 8.5
>L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein.
Length = 152
Score = 61.3 bits (142), Expect = 7e-10
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK- 431
RY D E T Q QG S K+ + +CPD A V+++MLY+SS ALK SL G++
Sbjct: 68 RYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL-GLESL 126
Query: 432 -YIQATDLSEASQEAVEEKLRATDR 503
+QA+++S+ +++V+ L + R
Sbjct: 127 FQVQASEMSDLDEKSVKSDLMSNQR 151
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +1
Query: 64 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK 237
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKK 59
>AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated
protein 60, isoform c protein.
Length = 152
Score = 61.3 bits (142), Expect = 7e-10
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK- 431
RY D E T Q QG S K+ + +CPD A V+++MLY+SS ALK SL G++
Sbjct: 68 RYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL-GLESL 126
Query: 432 -YIQATDLSEASQEAVEEKLRATDR 503
+QA+++S+ +++V+ L + R
Sbjct: 127 FQVQASEMSDLDEKSVKSDLMSNQR 151
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +1
Query: 64 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK 237
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKK 59
>L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein.
Length = 165
Score = 58.0 bits (134), Expect = 7e-09
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL-VGVQK 431
RY +FDF++T G SK K+ + CPD A +KKKM+Y+SS A+K SL G
Sbjct: 81 RYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGKIL 139
Query: 432 YIQATDLSEASQEAVEEKL 488
Q +D SE S + + KL
Sbjct: 140 QFQVSDESEMSHKELLNKL 158
Score = 31.5 bits (68), Expect = 0.69
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 64 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVE 183
M+SGV V +T+++++ + +K +RY++F I DE ++ VE
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVE 40
>AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated
protein 60, isoform a protein.
Length = 165
Score = 58.0 bits (134), Expect = 7e-09
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL-VGVQK 431
RY +FDF++T G SK K+ + CPD A +KKKM+Y+SS A+K SL G
Sbjct: 81 RYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGKIL 139
Query: 432 YIQATDLSEASQEAVEEKL 488
Q +D SE S + + KL
Sbjct: 140 QFQVSDESEMSHKELLNKL 158
Score = 31.5 bits (68), Expect = 0.69
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 64 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVE 183
M+SGV V +T+++++ + +K +RY++F I DE ++ VE
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVE 40
>AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated
protein 60, isoform b protein.
Length = 212
Score = 55.6 bits (128), Expect = 4e-08
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL-VGVQK 431
RY +FDF++T G SK K+ + CPD A +KKKM+Y+SS A+K SL G
Sbjct: 81 RYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGKIL 139
Query: 432 YIQATDLSEASQE 470
Q +D SE S +
Sbjct: 140 QFQVSDESEMSHK 152
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = +3
Query: 288 QCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLSEA 461
Q SE S K+ L++ CPD A V+++MLY+SS ALK SL G++ +QA+++S+
Sbjct: 142 QVSDESEMSHKE---LLNNCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDL 197
Query: 462 SQEAVEEKLRATDR 503
+++V+ L + R
Sbjct: 198 DEKSVKSDLMSNQR 211
Score = 31.5 bits (68), Expect = 0.69
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 64 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVE 183
M+SGV V +T+++++ + +K +RY++F I DE ++ VE
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVE 40
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 461 RFREVGRLDVLLNSDKGLFQSVERARVQHLLLD 363
RF E+G++D+ NS G+ + ++ V +LLD
Sbjct: 1828 RFLEIGKVDLSQNSSLGMAKLLDNVSVHGILLD 1860
>AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical
protein Y54F10AM.6 protein.
Length = 254
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 571 RQGRSVGERVRFRRELVCKCC 509
R+GR G+ ++FR E VC+CC
Sbjct: 196 RKGR--GKNIKFRTEKVCRCC 214
>AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical
protein Y50D7A.10 protein.
Length = 138
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 291 CQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQE 470
C+ S+ + L+ +CP+ + + +MLY+ S + + V K + D+ E E
Sbjct: 74 CKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNE-CHVSKNTEIRDIDEIDDE 132
Query: 471 AVEEK 485
+E K
Sbjct: 133 LLESK 137
>AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical
protein Y48G1A.3 protein.
Length = 388
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 222 RGSAEGRYRGMRYGLFDFE-YTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLY 383
R G+Y G + + H G+ E + +F S PD+ K KKK+LY
Sbjct: 141 RPKVNGKYEGAEEYPDELAVFIHSLCGSHEIHPVKIIFRFSKYPDSLKYKKKILY 195
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 407 KVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPITAFTHELATKPNP--LSDTPALTTR 577
++P + PS + S + R P +P+T+ + + T+P P D P TTR
Sbjct: 355 QIPNITDYTKPSAVSIEYASSSKERSDPPFSTPLTSNSQHVLTQPRPRDYEDGPQETTR 413
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 357 RCPGTTTSGRASVSC*PPTCPGTGACIQSQTGHIS 253
RC TT A V C CP ACI + +S
Sbjct: 320 RCSAGTTCQEALVKCAKAPCPSHAACIPNSNETLS 354
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 357 RCPGTTTSGRASVSC*PPTCPGTGACIQSQTGHIS 253
RC TT A V C CP ACI + +S
Sbjct: 385 RCSAGTTCQEALVKCAKAPCPSHAACIPNSNETLS 419
>AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical
protein Y76B12C.2 protein.
Length = 1119
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 428 EVHPSDRPLGSVSGGRRREAPRHRSPITAFTHELATKPNPLSDTP 562
E PS+ P+ G ++ EAP +P+ T + +TKP+ +P
Sbjct: 23 EPQPSEPPVKRARGAKKNEAP-STAPMPPKTTKKSTKPSRKQGSP 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,095,519
Number of Sequences: 27780
Number of extensions: 324001
Number of successful extensions: 1155
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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