Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10987
(772 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4) id... 72 4e-13
At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4) id... 72 4e-13
At4g00680.1 68417.m00093 actin-depolymerizing factor, putative s... 72 5e-13
At1g01750.1 68414.m00094 actin-depolymerizing factor, putative s... 71 1e-12
At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1) id... 70 1e-12
At5g52360.1 68418.m06497 actin-depolymerizing factor, putative s... 69 3e-12
At4g25590.1 68417.m03687 actin-depolymerizing factor, putative s... 68 8e-12
At3g46000.1 68416.m04977 actin-depolymerizing factor, putative (... 67 1e-11
At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3) id... 66 3e-11
At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6) id... 64 1e-10
At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5) id... 61 9e-10
At4g34970.1 68417.m04957 actin-depolymerizing factor, putative s... 58 6e-09
At3g45990.1 68416.m04976 actin-depolymerizing factor, putative s... 57 1e-08
At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3) id... 46 4e-05
At3g03290.1 68416.m00326 universal stress protein (USP) family p... 31 0.64
At5g55310.1 68418.m06893 DNA topoisomerase I, putative similar t... 30 1.5
At4g03610.1 68417.m00496 phosphonate metabolism protein-related ... 30 1.9
At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3) ... 30 1.9
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 29 4.5
At5g63320.1 68418.m07946 expressed protein 28 7.9
>At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 132
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/78 (39%), Positives = 52/78 (66%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY ++DF++ T+E +K K+F ++WCPD AKV+ KM+Y+SS D K+ L G+Q
Sbjct: 59 RYAIYDFDFV-----TAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 113
Query: 435 IQATDLSEASQEAVEEKL 488
+QATD +E + ++ ++
Sbjct: 114 LQATDPTEMDLDVLKSRV 131
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 76 VTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDL 231
+ V D CK + E+K + HR++V+ I + +KQ+ VE VGE YE F L
Sbjct: 1 MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 53
>At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 139
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/78 (39%), Positives = 52/78 (66%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY ++DF++ T+E +K K+F ++WCPD AKV+ KM+Y+SS D K+ L G+Q
Sbjct: 66 RYAIYDFDFV-----TAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120
Query: 435 IQATDLSEASQEAVEEKL 488
+QATD +E + ++ ++
Sbjct: 121 LQATDPTEMDLDVLKSRV 138
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 67 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDL 231
ASG+ V D CK + E+K + HR++V+ I + +KQ+ VE VGE YE F L
Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60
>At4g00680.1 68417.m00093 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/78 (41%), Positives = 53/78 (67%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY ++DF++T T + +K K+F ++W PDT++V+ KMLY+SS D K+ + G+Q
Sbjct: 66 RYAVYDFDFT-----TEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120
Query: 435 IQATDLSEASQEAVEEKL 488
+QATD SE S + ++ +L
Sbjct: 121 LQATDPSEMSLDIIKGRL 138
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +1
Query: 67 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDL 231
ASG+ V+D CK + E+K + +R++VF I DEK Q+ +E +G Y+ F +
Sbjct: 5 ASGMHVNDECKIKFLELKAKRTYRFIVFKI-DEKAQQVQIEKLGNPEETYDDFTSSI 60
>At1g01750.1 68414.m00094 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/78 (41%), Positives = 53/78 (67%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY ++D+++T T E +K K+F ++W PDT++V+ KMLY+SS D K+ L G+Q
Sbjct: 66 RYAVYDYDFT-----TPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
Query: 435 IQATDLSEASQEAVEEKL 488
+QATD SE S + ++ ++
Sbjct: 121 LQATDPSEMSLDIIKGRV 138
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +1
Query: 67 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDL 231
ASG+ VSD CK + E+K + +R++VF I DEK Q+ ++ +G YE F +
Sbjct: 5 ASGMHVSDECKLKFLELKAKRNYRFIVFKI-DEKAQQVMIDKLGNPEETYEDFTRSI 60
>At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1)
identical to SP|Q39250 Actin-depolymerizing factor 1
(ADF-1) (AtADF1) {Arabidopsis thaliana}
Length = 139
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY ++DF++ T+E +K K+F ++WCPD AKV+ KM+Y+SS D K+ L G+Q
Sbjct: 66 RYAIYDFDFV-----TAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120
Query: 435 IQATDLSE 458
+QATD +E
Sbjct: 121 LQATDPTE 128
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 67 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQF 219
ASG+ V D CK + E+K + HR++V+ I + +KQ+ VE VG+ YE+F
Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEF 56
>At5g52360.1 68418.m06497 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/77 (40%), Positives = 53/77 (68%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY ++DF++T T+E +K K+F ++W PD+++V+ KM+Y+SS D K+ L G+Q
Sbjct: 64 RYAVYDFDFT-----TAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 118
Query: 435 IQATDLSEASQEAVEEK 485
+QATD SE S + ++ +
Sbjct: 119 LQATDPSEMSLDIIKSR 135
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 67 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQF 219
ASG+ V D CK + E+K + +R+++F I D +Q+ VE +G Y+ F
Sbjct: 5 ASGMAVEDECKLKFLELKAKRNYRFIIFRI-DGQQVVVEKLGSPQENYDDF 54
>At4g25590.1 68417.m03687 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 130
Score = 67.7 bits (158), Expect = 8e-12
Identities = 31/77 (40%), Positives = 51/77 (66%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY +FDF++ T E +K K+F ++W PD+++V+ KM+Y+SS D K+ L G+Q
Sbjct: 57 RYAVFDFDFI-----TDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 111
Query: 435 IQATDLSEASQEAVEEK 485
+QATD SE S + ++ +
Sbjct: 112 LQATDPSEMSFDIIKSR 128
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 76 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDL 231
+ V D CK + E+K + +R+++F I D +Q+ VE +G + Y+ F L
Sbjct: 1 MAVEDECKLKFLELKSKRNYRFIIFRI-DGQQVVVEKLGNPDETYDDFTASL 51
>At3g46000.1 68416.m04977 actin-depolymerizing factor, putative
(ADF2) strong similarity to SP|Q9ZSK3
Actin-depolymerizing factor 4 (ADF-4) (AtADF4)
{Arabidopsis thaliana}; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY ++DF++ T+E +K K+F ++W PDTAKV+ KM+Y+SS D K+ L G+Q
Sbjct: 64 RYCIYDFDFV-----TAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 118
Query: 435 IQATDLSEASQEAVEEK 485
+QATD +E + + +
Sbjct: 119 LQATDPTEMGLDVFKSR 135
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +1
Query: 67 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDL 231
ASG+ V D CK + E+K + R +V+ I D KQ+ VE +GE Y+ F L
Sbjct: 5 ASGMAVHDDCKLKFMELKAKRTFRTIVYKIED-KQVIVEKLGEPEQSYDDFAASL 58
>At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 139
Score = 65.7 bits (153), Expect = 3e-11
Identities = 29/77 (37%), Positives = 49/77 (63%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY +FDF++ +SE + ++F ++W PDTA+V+ KM+Y+SS D K+ L G+Q
Sbjct: 66 RYAIFDFDFV-----SSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120
Query: 435 IQATDLSEASQEAVEEK 485
+QATD +E + + +
Sbjct: 121 LQATDPTEMDLDVFKSR 137
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 67 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDL 231
ASG+ V D CK + E+K + HR++++ I + +KQ+ VE +GE +E L
Sbjct: 5 ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60
>At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6)
identical to SP|Q9ZSK2 Actin-depolymerizing factor 6
(ADF-6) (AtADF6) {Arabidopsis thaliana}
Length = 146
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY ++DF++ TSE +K K+F +W P T+ ++ K+LYS+S D L + L G+
Sbjct: 73 RYAVYDFDFV-----TSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYE 127
Query: 435 IQATDLSEASQEAVEEK 485
IQATD +E E + E+
Sbjct: 128 IQATDPTEVDLEVLRER 144
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +1
Query: 70 SGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDL 231
SG+ V+D KTT+ E+++ K HRYVVF I +K++ VE G Y+ FL L
Sbjct: 13 SGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASL 67
>At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5)
identical to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}
Length = 143
Score = 60.9 bits (141), Expect = 9e-10
Identities = 25/79 (31%), Positives = 51/79 (64%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY +FDF++ T + +K K+F ++W P+ +K++ K+LY++S D L++ L G+
Sbjct: 70 RYAVFDFDFV-----TVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYE 124
Query: 435 IQATDLSEASQEAVEEKLR 491
+QATD +E + ++++ +
Sbjct: 125 LQATDPTEMGFDIIQDRAK 143
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +1
Query: 61 KMAS-GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLED 228
KMA+ G+ V+D C +++ ++K K HRY+VF I ++ +++ V+ VG Y LED
Sbjct: 6 KMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHD-LED 62
>At4g34970.1 68417.m04957 actin-depolymerizing factor, putative
similar to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 130
Score = 58.0 bits (134), Expect = 6e-09
Identities = 24/79 (30%), Positives = 50/79 (63%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY +FDF+Y T + + K+F ++W P+ +++++KM+Y++S L++ L GV
Sbjct: 57 RYAVFDFDYV-----TVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYE 111
Query: 435 IQATDLSEASQEAVEEKLR 491
+QATD +E + ++++ +
Sbjct: 112 LQATDPTEMGFDKIQDRAK 130
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 82 VSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDL 231
++D CK ++ E+K K HRYVV+ + ++ +++ V+ VG Y+ L
Sbjct: 1 MTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASL 51
>At3g45990.1 68416.m04976 actin-depolymerizing factor, putative
similar to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 133
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/57 (40%), Positives = 40/57 (70%)
Frame = +3
Query: 318 KQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKL 488
++K+ ++W P TAK++KKM+YSS+ D K+ L G+Q ATDL++ S +A+ ++
Sbjct: 76 ERKICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRRI 132
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = +1
Query: 76 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVE------TVGERNAEYEQFLEDL 231
+ + D CK T+ E+K+ + R +V+ I D Q+ VE GER YE+F L
Sbjct: 1 MVLHDDCKLTFLELKERRTFRSIVYKIEDNMQVIVEKHHYKKMHGEREQSYEEFANSL 58
>At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 124
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 67 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDL 231
ASG+ V D CK + E+K + HR++++ I + +KQ+ VE +GE +E L
Sbjct: 5 ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +3
Query: 255 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 434
RY +FDF++ +SE + ++F ++W PDTA+ + L G+Q
Sbjct: 66 RYAIFDFDFV-----SSEGVPRSRIFFVAWSPDTAR---------------RELDGIQVE 105
Query: 435 IQATDLSEASQEAVEEK 485
+QATD +E + + +
Sbjct: 106 LQATDPTEMDLDVFKSR 122
>At3g03290.1 68416.m00326 universal stress protein (USP) family
protein contains Pfam profile: PF00582 universal stress
protein family
Length = 274
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 181 ETVGERNAEYEQFLEDLQKGGTGE 252
ET G+ +EYE+F E+ ++GG GE
Sbjct: 45 ETDGDSTSEYEEFEEEKERGGEGE 68
>At5g55310.1 68418.m06893 DNA topoisomerase I, putative similar to
Swiss-Prot:P30181 DNA topoisomerase I [Arabidopsis
thaliana]
Length = 917
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Frame = +2
Query: 320 TEALPDVVVPGHRQGQE---EDVVL*LVRRSEKVPCRSSEVHPSDRPLGSVSGGRRREAP 490
TEA VVP G E ED + + +R+ ++ P + + + + G + +P
Sbjct: 3 TEAFVKPVVPNGHDGYEDEDEDDIPLVFKRNSNTAATTNRPSPINNAMRNSAIGSTKSSP 62
Query: 491 RHRSPITAFTHELATKPNPLSDTPALTTRGHDTTSRLVLLQRKTNSI 631
RSP+T+ ++ PAL + S L R S+
Sbjct: 63 PMRSPLTSPNRSASSSTRSSMMKPALPSSSSVQRSTLKSPLRDDRSV 109
>At4g03610.1 68417.m00496 phosphonate metabolism protein-related
weak similarity to PhnP protein. (Swiss-Prot:P16692)
[Escherichia coli]
Length = 290
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -1
Query: 322 CFLLASDVPWHWCVYSKSNRPYLIPRYR 239
C L SD P H C S S P+L P YR
Sbjct: 29 CLLQPSDPPCHVCSQSLSLLPHLNPNYR 56
>At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3)
family protein low similarity to Translation initiation
factor IF-3 from [subsp. Schizaphis graminum] {Buchnera
aphidicola} SP|P46243, {Salmonella typhimurium}
SP|P33321; contains Pfam profiles PF05198: Translation
initiation factor IF-3 N-terminal domain, PF00707:
Translation initiation factor IF-3 C-terminal domain
Length = 520
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = -2
Query: 771 PPISYNGLPRPSNRNALLLHGRNRQGALVPTRADSQEVLPPVKSIILILFVFLCNNTKRL 592
P I L S++ L+ R L D + L P K ++ +LF F C L
Sbjct: 173 PKIEAKDLKFKSDQALKLMESGYRVKCLAVPDKDKHKELEPEK-LLELLFRFTCFIGDAL 231
Query: 591 VVSWPRVVRAG 559
V SWP R G
Sbjct: 232 VESWPEADRKG 242
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 428 EVHPSDRPLGSVSGGRRREAPRHRSPITAFTHELATKPNPLSDTPALTTRGH 583
++ P P+ + +G R P + + + H+L P P A+TT GH
Sbjct: 62 QLRPPSIPVTTNTGHRHCRPPSNPATTNSGHHQLRPPPPPPPPLSAITTTGH 113
>At5g63320.1 68418.m07946 expressed protein
Length = 569
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 350 GHRQGQEEDVVL*LVRRSEKVPCRSSEVHPSDRPLGSVSGGRRRE 484
G ++ QE +VV + +E V EVHP DR G R+E
Sbjct: 311 GDKEEQETEVVDMRKQENEVVDMGVEEVHPLDRSEGRTLSPHRKE 355
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,358,983
Number of Sequences: 28952
Number of extensions: 304891
Number of successful extensions: 1082
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1716774400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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