Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10984X
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   0.77 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   0.77 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.0  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   4.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.5  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 283 AMMVSHPFIYKLDRNSRKFLPSTQIIVIYNILEC*FQVSNNYWFRLSLNCVV 438
           AM+ S    YK   + +  L + + I IY+I     + ++N+W R  L  ++
Sbjct: 120 AMLTSMVMFYKRSNDLKTLLSNLESIQIYSIKP--KERNSNHWVRSGLFALI 169


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 283 AMMVSHPFIYKLDRNSRKFLPSTQIIVIYNILEC*FQVSNNYWFRLSLNCVV 438
           AM+ S    YK   + +  L + + I IY+I     + ++N+W R  L  ++
Sbjct: 76  AMLTSMVMFYKRSNDLKTLLSNLESIQIYSIKP--KERNSNHWVRSGLFALI 125


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
 Frame = +3

Query: 186 VQRLTLWKPYEKSHIFIRA----TVLTENLFFLNHTGH 287
           ++ + +WK Y+++ IFI       +L    FFLN   H
Sbjct: 118 LKHMLIWKSYKRTQIFITCELFFVILLWISFFLNFMLH 155


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 3  HIINVTSGFHRNSKDPN 53
          H I+ T  +H N +DPN
Sbjct: 44 HPIHQTVIYHNNPRDPN 60


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/26 (23%), Positives = 15/26 (57%)
 Frame = +1

Query: 43  KTQITDLIDRCRSLNLQWSIKISLTH 120
           +T + D+I RC ++ ++  +   + H
Sbjct: 93  ETALADMISRCNAVGVRIYVDTVINH 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,695
Number of Sequences: 336
Number of extensions: 3098
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)